KEGG   Brassica oleracea (wild cabbage): 106316076
Entry
106316076         CDS       T04124                                 
Name
(RefSeq) RING-box protein 1a-like
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03420  Nucleotide excision repair
boe04120  Ubiquitin mediated proteolysis
boe04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    106316076
   04120 Ubiquitin mediated proteolysis
    106316076
  09124 Replication and repair
   03420 Nucleotide excision repair
    106316076
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:boe04121]
    106316076
   03400 DNA repair and recombination proteins [BR:boe03400]
    106316076
Enzymes [BR:boe01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     106316076
Ubiquitin system [BR:boe04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   106316076
  Multi subunit type E3
   SCF complex
    Ring finger protein
     106316076
   Cul2 complex
     106316076
   Cul3 complex
     106316076
   Cul4 complex
     106316076
   Cul7 complex
     106316076
   Cul8 complex
     106316076
   Cul9 complex
     106316076
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      106316076
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      106316076
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11
Other DBs
NCBI-GeneID: 106316076
NCBI-ProteinID: XP_013609396
UniProt: A0A0D3EDS1
LinkDB
Position
C9:45113593..45114840
AA seq 118 aa
MATLDSDVNMIPAGESSSSVVASSSSKKAKRFEVKKWSAVALWAWDIVVDNCAICRNHIM
DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNSEWEFQKYGH
NT seq 357 nt   +upstreamnt  +downstreamnt
atggccacactcgatagcgacgtaaacatgatccctgcgggggaatcctcgagcagcgtc
gtggcttcttcgtcgagcaagaaggcgaagagattcgaagtgaagaagtggagcgccgtg
gctctttgggcttgggatatcgtcgtcgacaattgcgccatctgcagaaaccacatcatg
gatctctgcattgagtgtcaggctaatcaggccagcgctactagtgaggaatgcactgtt
gcttggggggtttgcaatcatgctttccactttcactgcatcagcagatggttgaagact
cgtcaagtttgtccattggataacagtgagtgggagttccagaagtatggtcactaa

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