Brassica oleracea (wild cabbage): 106316360
Help
Entry
106316360 CDS
T04124
Name
(RefSeq) 4-coumarate--CoA ligase-like 1
KO
K01904
4-coumarate--CoA ligase [EC:
6.2.1.12
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00130
Ubiquinone and other terpenoid-quinone biosynthesis
boe00940
Phenylpropanoid biosynthesis
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Module
boe_M00039
Monolignol biosynthesis, phenylalanine/tyrosine => monolignol
boe_M00137
Flavanone biosynthesis, phenylalanine => naringenin
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
106316360
09110 Biosynthesis of other secondary metabolites
00940 Phenylpropanoid biosynthesis
106316360
Enzymes [BR:
boe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.12 4-coumarate---CoA ligase
106316360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
LysR_substrate
Motif
Other DBs
NCBI-GeneID:
106316360
NCBI-ProteinID:
XP_013609690
LinkDB
All DBs
Position
C9:9684315..9687527
Genome browser
AA seq
543 aa
AA seq
DB search
MEAQKQDNEHIFRSLYPSVPIPDKLTLPEFVLQGVEEFTENVAFVEAVTGKSVTYGDVVR
DTKRLAKALTSLGLRKGQVMVVVLPNVAEYGITALGIMSAGGVFSGANPTALVSEIKKQV
EASGARGIITDSTNFEKVKALGLPVIVLGEEKIEGAVNWKDLLEAGDRSGDNNREKILQT
DLCALPFSSGTTGLQKGVMLTHRNLIANLCSTLFSVRSEMIGQIVTLGLIPFFHIYGIVG
ICCATMKNKGKVVAMSRYDLRLFLNALITHEVLFAPIVPPIILNLVKNPIVDEFDLSKLK
LRSVMTAAAPLAPELLTAFEAKFPNVQVQEAYGLTEHSCITLTHGDPDKGQGIAKRNSVG
FILPNLEVKFIDPDTGRSLPKNTSGELCVRSQCVMQGYFENKEETEKTIDEEGWLHTGDI
GYIDDDGDIFIVDRIKELIKYKGFQVAPAELEAILLTHPSVEDVAVVPLPDEEAGEIPVA
CVVMNPKAKEKEEDILSFVAANVAHYKKIRAVHFVDSIPKSLSGKIMRRLLRDNILSIKK
TLF
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaggctcaaaagcaagacaatgaacacattttccgcagtctatatccatctgtgccc
attcccgacaagcttacactgcctgagtttgtgctccaaggagtagaagaattcacagag
aatgtggcgttcgtagaagctgtgaccggtaaatccgtcacgtacggtgatgtagtgaga
gacacaaagaggctagccaaagcgttgacctcacttggactaaggaaaggtcaagtaatg
gttgtggttctaccaaatgtcgccgagtatgggattactgcccttggcattatgtccgcc
ggtggagttttctctggcgctaatccgacggctcttgtctccgagatcaagaagcaagtt
gaagcttctggtgctagaggaatcatcactgattctactaacttcgaaaaggtgaaggct
ttgggtttaccagtaatagtgttaggtgaagagaagatcgaaggagcagtgaactggaaa
gatcttctagaagcaggagacagatctggagataacaatagagagaagattcttcagaca
gatctatgtgcacttcctttctcttcaggcacaacaggattacaaaagggagtgatgctc
acacatcgcaacctaatagcaaatctttgctctactctattcagcgtccggtctgaaatg
atcggccagatcgtgactcttggtttgattccgttctttcacatttacggtatcgttgga
atctgttgtgctacaatgaagaataaaggcaaagttgttgctatgagtcggtatgatcta
aggcttttcttgaatgctttgattactcatgaggtcttgtttgcgcctattgttccacct
attatattgaatcttgtcaagaatccgatcgtcgatgagtttgatctttctaagcttaaa
ctccgttctgttatgactgctgccgctcccttagcccccgagcttctcactgcctttgaa
gccaagtttcctaatgttcaagtccaagaggcttacggattaacggagcatagctgcatt
actttaactcacggtgatcctgataaaggacaaggaatcgcgaaacgaaactctgtcgga
tttatacttccgaatctcgaggtgaagttcatagatcctgacactggccggtcgcttccg
aagaacacttctggtgagctctgtgtgaggagccagtgtgtgatgcaaggttacttcgag
aacaaggaagagacggagaagacgatcgatgaagaaggttggctccacactggagatata
ggttacattgatgatgatggagacattttcatcgttgatcgcatcaaagaacttatcaaa
tacaagggctttcaggtggctccggcggagcttgaagctattctactcactcatccatca
gttgaagacgtagccgtcgtgccgttaccggacgaggaagcgggagagattccggtggct
tgtgttgtgatgaatccaaaagcaaaagagaaagaagaagacatccttagctttgttgcg
gcaaatgtggctcactacaagaagatcagagccgtccattttgtggattcaattcccaag
tctctctctggtaaaatcatgaggaggcttctcagagacaacatcctcagcatcaagaaa
acgctattctaa
DBGET
integrated database retrieval system