Brassica oleracea (wild cabbage): 106327047
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Entry
106327047 CDS
T04124
Name
(RefSeq) RING finger and CHY zinc finger domain-containing protein 1
KO
K10144
RING finger and CHY zinc finger domain-containing protein 1 [EC:
2.3.2.27
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106327047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
boe04121
]
106327047
Enzymes [BR:
boe01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
106327047
Ubiquitin system [BR:
boe04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
106327047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zinc_ribbon_6
zf-CHY
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
106327047
NCBI-ProteinID:
XP_013620507
UniProt:
A0A0D3AXM4
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All DBs
Position
C2:complement(49368385..49371925)
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AA seq
305 aa
AA seq
DB search
MEGVHFNHFVEQPQKTDREKSEMLSPHSSNEETESLILELESAESLLKEVLDRGLMEHGC
PHYRRRCCIRSPCCDEIFGCHHCHNEAKNNISVDPKQSHDIPRQKVEQVICSLCGTEQEV
RQTCTNCGVCMGKYFCEACKLYDDDTSKKQYHCDGCGICRIGGHENFFHCYKCGCCYSIL
LKNSHPCVEGAMHHDCPICFEYLFESRNDVTVLPCGHTIHQKCLEEMREHYQYACPLCSK
SVCDMSKVWEKFDVEIAATPMPEPYQNKMVQILCNDCGTKSEVQYHVVAQKCPNCKSYNT
RQTRG
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggagggggtacatttcaaccatttcgttgagcaaccccagaagactgaccgagagaag
agtgagatgctcagccctcattcaagcaatgaagaaactgagtcgttgattctcgaactc
gagtcggcagagtcattattaaaagaagtccttgacagaggactaatggaacatggatgt
cctcattacagaagaaggtgttgcattagatctccttgctgtgatgagatctttggttgc
catcactgtcataatgaggcgaagaacaatataagtgtagatccgaaacagagtcatgat
attcctcgccagaaagttgaacaggttatttgctcactctgtggcactgaacaagaggtt
cgccaaacttgcaccaactgcggagtgtgcatggggaagtacttctgtgaagcctgcaag
ctctacgatgatgatacatctaaaaaacaatatcactgcgacggctgtggaatatgcaga
atcggcggacatgaaaatttctttcactgttacaagtgtggctgttgttactcaatcctt
ctcaagaacagtcacccttgtgttgaaggagcaatgcatcacgactgccccatttgtttt
gagtacctgtttgaatcaaggaacgatgtaacagttttgccctgcggacacaccatccat
cagaagtgcttggaggaaatgagagaacattaccaatacgcgtgcccgctttgctcaaaa
tctgtatgcgacatgtcaaaggtgtgggagaaatttgacgtggagattgctgctacacca
atgccagaaccataccagaacaaaatggttcagatcctctgcaacgactgtgggacaaaa
tcagaggtccagtaccatgtggtagctcagaaatgcccaaactgcaaatcatacaacact
cgccaaacccgaggctga
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