Brassica oleracea (wild cabbage): 106327713
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Entry
106327713 CDS
T04124
Name
(RefSeq) isoleucine--tRNA ligase, chloroplastic/mitochondrial-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106327713
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106327713
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106327713
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
106327713
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106327713
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106327713
Prokaryotic type
Other AARSs
106327713
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
zf-FPG_IleRS
tRNA-synt_1e
DUF7685
Motif
Other DBs
NCBI-GeneID:
106327713
NCBI-ProteinID:
XP_013621402
UniProt:
A0A0D3AX03
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All DBs
Position
C2:complement(47525693..47533202)
Genome browser
AA seq
1087 aa
AA seq
DB search
MSSLFIKSFAGNPREAAAMAMVQSSSYRVLSGRSCSNLRRNTPLDSFLAKGRSPVKAFSS
MFSTQPNNEFGHSSKRRSRGPVMAAKKASEGEKQEEGKYKHTVDLPKTGFGMRANALTRE
PELQKLWDENQVFKRVSDSNNGGSFVLHDGPPYANGDLHMGHALNKILKDIINRYKLLQN
YKVQYVPGWDCHGLPIELKVLQSMDQEVRKELTPLKLRAKAAKFAKATVEKQMESFKRFG
VWADWNNPYLTLDPEYEAAQIEVFGQMALQGYIYRGRKPVHWSPSSRTALAEAELEYPEG
HISRSIYAIFKLVGGVKTSLLEEFMPNICLAVWTTTPWTIPANAAVAVNAKLQYSVVEVQ
SSSEDESASTSNKKKMVGKVLKNQQKLFVIVAMDLVPALEAKWGVKLIITKTFLGSDLEG
FRYTHPVDKRDCPVVIGGDYITTESGTGLVHTAPGHGQEDYATGLKYALPIVSPVDDGGN
FTEEAGQFRGLSVLVEGNIAVVSYLDENMSLLMEESYAHKYPYDWRTKKPTIFRATEQWF
ASVEGFRKATMEAINNVKWIPHQAVNRITAMTSSRSDWCISRQRTWGVPIPVFYHVQTKE
PLMNEETVDHVKSIISQKGSDAWWYMSVEDLLPEKYRDKAADYEKGTDTMDVWFDSGSSW
AGVLGKREGLTFPADVYLEGTDQHRGWFQSSLLTSIATKGKAPYSSVITHGFVLDEKGMK
MSKSLGNVVDPLMVIEGGKNSKDAPAYGADVMRLWVSSVDYTGDVLVGPQILRQMSDIYR
KLRGTLRYLLGNLHDWRVDNAVPYQDLPIIDQHALFQLENVVKNIQECYENYQFFKIFQI
IQRFTIVDLSNFYFDIAKDRLYTGGTSSFTRRSCQTVLSTHLLSILRVIAPIVPHLAEDV
WQNLPFEYRNGDGSAAKFVFELKWPTLNEQWLSFPAEDILFWERLLELRTEVNKVLELAR
NGKLIGSSLEAKVYLHTPDAGMASKLLKMCEAQNEADTLQRIFITSQVEVLSSIEEMVSN
VQHTGEYGEGENKVWIGVSRAEGSKCERCWNYSGQVGSFSDHSTLCGRCFNVIVANPPQP
AVAAVIS
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccttgttcatcaaatcttttgcgggaaatcccagggaagcagctgcaatggca
atggtgcagtcatcatcttacagagtactgtcaggtagaagttgttcgaatttaaggaga
aacacaccgttggattcctttcttgccaagggaaggtctcccgtcaaggcgttttcttcc
atgttttcgactcaaccaaacaacgagtttggtcattcatcaaagcgacggtctcgtggg
cctgttatggcggcaaagaaagcatctgaaggggagaagcaagaagaagggaagtacaag
cacaccgttgatttgccgaagacaggttttggtatgagagcaaatgctctgacgagggag
cctgaactccagaagttgtgggacgagaaccaggtcttcaagagagtttcagatagtaac
aatggagggagtttcgttcttcatgatggtcctccttatgccaatggtgacctacatatg
ggtcatgctcttaacaagatactgaaggatatcattaatcgctataagcttcttcaaaac
tataaagttcagtacgttcctgggtgggattgccatggccttccaattgagttgaaagtt
ctgcagtccatggatcaggaagtgagaaaggaacttacaccactaaagttgagggcaaag
gcagcgaaatttgccaaagcaacagtcgagaaacaaatggaatcatttaagcggtttgga
gtatgggcagactggaacaatccttatctcactcttgatccggaatatgaagcggcccag
attgaagtatttggccaaatggccttgcaagggtacatctataggggtaggaaaccagtt
cactggagcccttcatctcgtactgctcttgcagaagctgaattagagtatccggagggt
catatctcaagaagcatatatgctattttcaaattggttggcggagtgaaaacaagcctt
ctagaagagtttatgcctaatatatgcttggcagtatggacaactacgccatggactatt
cctgctaatgctgctgttgcggtgaatgcaaagcttcagtattctgttgttgaagtgcag
tcatcctcagaagatgaatctgcgtctacaagcaacaaaaagaaaatggtggggaaagtt
ctgaagaatcaacaaaagcttttcgtgattgtagcgatggaccttgtgccagcattagaa
gcgaaatggggtgtgaagcttatcattactaaaacattcctgggttcagatcttgaaggc
ttcaggtacacacatccagttgacaagagggactgtccagtcgttatagggggtgattac
ataactacggaatcaggaacagggttggttcacactgcccctggtcatggtcaggaggat
tatgcaactggcctgaagtatgcgctacctattgtctctcctgtggatgatggaggaaac
ttcactgaagaagctggacagtttagaggactctctgtccttgtagaagggaatattgct
gttgttagttacctggatgaaaatatgtctctgctcatggaagaatcttatgctcataag
tacccatatgattggagaactaagaaacctacgatatttagagcgaccgagcaatggttc
gcatcggttgaagggtttcgcaaggccactatggaggcaatcaacaatgttaaatggata
ccacatcaggcagtaaacagaataactgccatgacttcaagtcgatccgattggtgcatc
tcgagacaaaggacatggggtgtccctatccctgtcttttatcatgttcagacaaaagaa
cctctcatgaatgaagagacagttgaccatgttaaatctataatttcccaaaagggtagt
gatgcatggtggtatatgtcggtggaagacctacttcctgagaaatatcgtgataaagca
gctgattatgaaaaagggactgatacaatggatgtctggtttgactcgggttcctcttgg
gctggtgtgttggggaaacgtgagggtcttactttccctgcagatgtgtatctagaaggt
acagatcagcatcgtggatggttccagagttctttgttaacaagcatcgcaacaaaaggc
aaggccccctattcttccgtcatcacacatggttttgtactggatgagaagggtatgaaa
atgagcaagtctttgggtaatgtggttgacccacttatggtcattgaaggagggaagaat
tcaaaggacgcacctgcttatggggctgatgttatgcgtctctgggtttctagtgtagat
tacacaggggatgtacttgtaggcccacagattcttcggcaaatgtctgatatatataga
aagttgagaggaactttgagatatctcttggggaatcttcatgattggagagttgataat
gctgttccgtaccaggatttacccatcattgatcagcatgctctcttccagcttgagaat
gttgtaaagaacatacaagagtgttacgagaactaccagtttttcaaaatattccagatc
atacaacgattcacaattgtcgacctgtcaaacttctacttcgatattgctaaagataga
ctgtatactgggggaacttcgagttttacccgaagaagctgtcaaaccgttctttcaaca
catcttttatccatactgagagtgatcgcgccgatagtacctcacctagcagaagatgtc
tggcaaaatctgccatttgagtatagaaatggagatggctctgcagcaaaatttgtcttt
gagcttaaatggcctacgttgaacgaacaatggctttcatttcctgctgaagatattctc
ttctgggaaaggcttctcgagttgagaaccgaagtgaacaaagtgctggagctcgcacgt
aatggcaaattaatcggttccagtttagaagcgaaggtgtatctccataccccagatgca
ggcatggcctcgaagttattaaagatgtgtgaagctcagaatgaagctgacacactgcaa
cgcatattcataacatcacaggttgaggtactgtcgtcaatagaggagatggtgagtaat
gtgcagcacactggagagtatggggagggagaaaacaaagtgtggattggtgtgtcacga
gccgagggatccaagtgtgagaggtgctggaactactcggggcaggtcggatcgttttct
gaccattctactctctgtggacggtgtttcaatgtcattgttgctaatccgcctcagcct
gcggttgcggccgtaatcagctga
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