Brassica oleracea (wild cabbage): 106328183
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Entry
106328183 CDS
T04124
Name
(RefSeq) lycopene epsilon cyclase, chloroplastic
KO
K06444
lycopene epsilon-cyclase [EC:
5.5.1.18
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00906
Carotenoid biosynthesis
boe01100
Metabolic pathways
boe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
106328183
Enzymes [BR:
boe01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.18 lycopene epsilon-cyclase
106328183
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Motif
Pfam:
Lycopene_cycl
DAO
Pyr_redox_2
HI0933_like
GIDA
FAD_binding_2
FAD_oxidored
Thi4
ECF_trnsprt
Pyr_redox_3
Motif
Other DBs
NCBI-GeneID:
106328183
NCBI-ProteinID:
XP_013622022
UniProt:
A0A0D3B320
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Position
C3:complement(6686423..6689466)
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AA seq
530 aa
AA seq
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MECVGARNFAAMAFTAFPSRSSRPAVKRYSFKNLRCGLCSRVVRASVGSGGGGSGSESCV
AVREDYADEEDFVKAGGSEIMFVQMQQNKDMDEQSNLVDKLPPISVGDGGALDLVVIGCG
PAGLALAAESAKLGLKVGLIGPDLPFTNNYGVWEDEFNDLGLQKCIEHVWRDTIVYLDDN
NPITIGRAYGRVNRRLLHEELLRRCAESGVSYLCSKVESITEAPDGLRLVACEKNTIVPC
RLATVASGAASGKLLQYELGGPRVCVQTAYGVEVEVENSPYDPEQMVFMDYRDYTNQKVR
CLEAEYPTFLYAMPMTKTRVFFEETCLASKDVMPFDLLKKKLMLRLDTLGIRILKTYEEE
WSYIPVGGSLPNTEQKNLAFGAAASMVHPATGYSVVRSLSEAPNYASVIADILKHDTTSF
TKHINTNISRQAWDTLWPQERKRQRAFFLFGLALIVQLDIGGIRSFFHTFFRLPKWMWQG
FLGSTLTSGDLVLFAFYMFIIAPNNLRKGLINHLVSDPTGATMIKTYLRV
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtgttggtgctcgcaatttcgctgcaatggcgttcacagcttttccttctcgg
agctcccgaccggcggtgaagagatacagttttaagaatcttcgctgcggtttgtgtagt
agagtcgtcagagctagcgtcggcagcggaggaggaggctccggtagcgagagttgcgtt
gcggtgagggaggattacgctgacgaagaagattttgtgaaggctggtggttcggagatt
atgttcgttcaaatgcagcagaacaaagacatggatgaacagtctaacctcgttgataag
ttacctcctatatcagttggtgatggtggtgctttggacctagtggttattggttgtggt
cctgctggtttagccttggctgcagagtcagctaagttaggactaaaagttggactgatt
ggtccggaccttcctttcactaacaactacggtgtttgggaagatgaattcaacgatctt
ggcttgcaaaaatgtattgagcatgtatggagagatactattgtctatctagacgataac
aatcccattaccattggccgtgcttatggaagagttaatcgacggttactccacgaggag
ctcttgaggaggtgtgccgagtcaggtgtctcgtatctttgctcaaaagttgagagcata
acagaagctcctgatggccttaggctcgttgcctgtgaaaaaaacaccattgttccgtgc
agacttgccactgttgcgtctggagcagcttcagggaagctcttgcaatacgaacttgga
ggacctagagtctgtgtccaaactgcatatggcgtggaggttgaggtggaaaacagtcca
tatgatccagagcaaatggttttcatggactacagagattatacgaaccagaaagttcgg
tgcttagaagctgagtatccaacgtttctttacgccatgcctatgacaaagacgagagta
ttctttgaggagacatgtctagcctcaaaagatgtcatgccctttgatttgcttaaaaag
aagctcatgttacgattagatacactcggaatccgaattctaaagacttacgaagaggaa
tggtcttatatcccagtaggtggttccttaccaaacactgaacaaaagaacctcgccttt
ggtgctgcagctagcatggtacatcccgctacaggctattcagttgtgagatctttgtct
gaagctccaaattatgcatcagtcatcgcggatatactaaaacatgatactacttccttc
accaaacacatcaacaccaatatttcaagacaagcttgggatactctatggccacaagaa
aggaaacgacaaagagcattctttctcttcggccttgcgctcatagttcaactcgatatc
ggaggcattaggagcttcttccacactttcttccgtcttccaaaatggatgtggcaaggg
tttctaggatcaacattaacatcaggagatctggttctgtttgctttctacatgttcatc
attgcaccaaacaatttaagaaaaggtctcattaatcatctggtctctgatccaaccgga
gcaaccatgattaaaacctatctcagagtatga
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