Brassica oleracea (wild cabbage): 106328470
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Entry
106328470 CDS
T04124
Name
(RefSeq) small nuclear ribonucleoprotein-associated protein B'-like isoform X1
KO
K11086
small nuclear ribonucleoprotein B and B'
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106328470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
boe03019
]
106328470
03041 Spliceosome [BR:
boe03041
]
106328470
03032 DNA replication proteins [BR:
boe03032
]
106328470
Messenger RNA biogenesis [BR:
boe03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
106328470
Spliceosome [BR:
boe03041
]
Complex A
U1 snRNP components
Sm proteins
106328470
U2 snRNP components
106328470
Complex B
U1 snRNP components
106328470
U4/U6.U5 tri-snRNP components
106328470
Complex C
U2 snRNP components
106328470
DNA replication proteins [BR:
boe03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
106328470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
106328470
NCBI-ProteinID:
XP_013622370
UniProt:
A0A0D3BKM5
LinkDB
All DBs
Position
C3:complement(57169499..57171097)
Genome browser
AA seq
242 aa
AA seq
DB search
MSMSKSSKMLQFINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPGKGKKIN
EEREERRTLGLVLLRGEEVISMTVEGPPPPEESRAKSGPAAALAGPGVGRAAGRGVPTGP
LVQAQPGLAGPVRGVGGPSPGMMQPQISRPPVMRPPPGQMLPPPMGRGIPPPPSYGGMRP
PFGGPPPPYGQRPMGPPPGAMMRGPPPPPHGMQGPPPPRPPPGGFAQRPGMQGPPPPHNQ
QQ
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgaagagctcaaagatgctccagttcataaactacaggatgcgagtcacc
atccaagacggaaggcagctcgtcggcaaattcatggccttcgaccgccacatgaacctc
gtcctcggcgactgcgaggagttccgcaagcttccgccaggcaaaggcaagaagatcaac
gaagagagagaggagcgacgcacgctcggcttggtcttgctcagaggcgaagaagtcatc
tccatgacggtagaaggaccgcctcctcccgaagaatctcgcgctaaatccggcccagca
gcggctctcgctgggcctggagtgggccgtgctgctggacgtggagtgcctacgggtccg
cttgtccaagctcagcctgggcttgcaggcccggttcgtggagttggtgggccttcgcct
gggatgatgcagcctcagatctctaggcctccggttatgagacctcctcctggacagatg
cttccgccgccgatggggagaggtattcctcctcctccgtcttatggtggtatgaggccg
ccgtttggtggaccgccgcctccgtatgggcagaggcctatgggtcctcctcctggtgcg
atgatgagaggtcctcctccacctcctcatgggatgcaaggtccgcctccgcctaggcct
cctcctggtggttttgctcagcgtcccggcatgcaagggccgccgcctccgcataatcag
cagcagtaa
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integrated database retrieval system
