Brassica oleracea (wild cabbage): 106334332
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Entry
106334332 CDS
T04124
Name
(RefSeq) transcription factor MYC1-like
KO
K28363
basic helix-loop-helix transcription factor family protein
Organism
boe
Brassica oleracea (wild cabbage)
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106334332
Transcription factors [BR:
boe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106334332
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Motif
Pfam:
bHLH-MYC_N
bHLH-TF_ACT-like_plant
HLH
bHLH_IRO3
PBP2
bHLH_SAC51
Helical_needle
SLATT_6
Motif
Other DBs
NCBI-GeneID:
106334332
NCBI-ProteinID:
XP_013628089
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Position
C3
Genome browser
AA seq
551 aa
AA seq
DB search
MSLTMDDDGVEAPRGRSRRRNSLLSKQLAVAVKSVQWSYAIFWSSSPTQSGVLEWGEGCY
NGEMKKRKKRYEVHYKHVLQRSNQLRKLYLCMREGDSTNTISTTHDDGYHNCNSTTSMLL
SPDDLSDEEWYYVVSMSYVFSPSQCLPGRALATGETIWLCNAQYADSKLFSRSLLARSAS
IQTVVCFPYLGGVIELGVTELISEDPSLLQHIKSCLLETSKPDCPSNNFSAHQYNADDDK
KNQMKIKISEVNSALQENPQIQFGISDLMLDEDLHYKRTVSTLLKYAADKSKMKNSHHRQ
PELVSSNSGSSFLRWKQPSSNLLLKHSNSQNVLRKILHDVPLMHSVDTKTLSTNKMFGLN
QDDPSVKRKENEKFSVLRAMVPTVNEVDKEEILNNTIKYLQELEERVEELESCMGSVNFV
GKQRKTKKSLNDSVLIEETSGNYDDSTKIDGNSGETEQAVTVLRDETHFRVKLKETEVVM
EVRCSYRDYIVADIMETLSKLHMDAFSVRSHTLNGFLTLNLKAKLREAAVASVGMIKREL
RRVIGETMRIT
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgacaatggatgatgatggtgtagaagcaccaagaggaagaagcagaagaaga
aacagcttattaagtaaacaactcgctgtagctgtaaaaagtgttcagtggagctacgca
atcttctggtcctcttcaccaactcaatctggggttttggagtggggagaaggatgttac
aatggagaaatgaagaagaggaagaagagatacgaagttcattataaacatgtgttgcag
agaagcaaccaacttaggaaactttatctgtgtatgcgtgaaggagacagtactaatact
attagtactactcatgatgatggttatcacaactgtaacagtacaacaagtatgctgctg
tcaccagatgacctctcagatgaagagtggtactatgtagtctccatgtcctatgtcttc
tctccttctcaatgtttgccaggaagagctttggccacgggtgagaccatatggctttgc
aacgctcagtacgcggatagcaaactcttctctcgttctttgttagcaagaagcgcatca
attcagactgttgtgtgtttcccttacttgggcggtgtgattgagcttggcgtcaccgaa
ttgatttcagaggatcctagcctgcttcaacacatcaaatcttgcttgttggagacatcg
aagcccgattgcccttctaacaacttctctgctcaccaatacaatgctgatgatgataag
aagaatcaaatgaaaattaagataagtgaagtaaactcggcactccaagaaaacccacag
attcagtttggtatttctgatctcatgttggatgaagacttgcattacaagagaactgtc
tcaacactactcaaatacgctgctgataaatcaaaaatgaagaacagtcatcatcgtcaa
cccgaacttgtttcttctaattctggctcaagtttcttgcggtggaagcaaccaagctca
aatcttcttctgaaacatagcaattcacagaacgtgctgcggaagatattgcatgacgta
cctttgatgcactccgtagacacaaagacactgtccacaaataagatgtttggtctgaat
caagatgatccttcggttaaaagaaaagagaacgaaaagttcagtgtccttagagctatg
gttcccactgtcaacgaggttgataaagaagagatactgaacaacacaatcaagtacttg
caagaactagaggaaagagtagaagagctagaatcttgtatgggatctgttaacttcgta
gggaaacaaagaaagacgaaaaagagccttaacgactctgtgttaatcgaggagacatca
gggaactacgacgacagcacgaagatcgatggaaactcaggagaaaccgaacaagctgtc
actgtattgagagatgagacacattttagagttaaactgaaagaaacagaagttgtgatg
gaagtaagatgttcttacagagactacattgttgcggacatcatggagactctgagcaaa
cttcacatggatgctttctctgtcagatctcatacacttaatgggttcctcacacttaat
ctcaaggcaaagttgcgtgaggctgcagttgcctcagtagggatgattaagcgagagctg
aggagagtaattggtgagactatgagaatcacctaa
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