Brassica oleracea (wild cabbage): 106337536
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Entry
106337536 CDS
T04124
Name
(RefSeq) transcription factor PIF4-like isoform X1
KO
K16189
phytochrome-interacting factor
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
106337536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
boe03000
]
106337536
Transcription factors [BR:
boe03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
106337536
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GFIT
Motif
Pfam:
HLH
bHLH_SAC51
bHLH_LHW
WDR55
Motif
Other DBs
NCBI-GeneID:
106337536
NCBI-ProteinID:
XP_013632091
UniProt:
A0A0D3C5X4
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All DBs
Position
C4:52053920..52056523
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AA seq
407 aa
AA seq
DB search
MEHQGWNFEENCNLSNNRRSSLRPQDELVELLWRDGQVVLQSQTNREQTQAQTVKHDHHQ
ETLRSHTFLEDQETVSWLQYPPYEDQFITDGFSSHFFSTGNPLERPASEMVKHEAGPDPP
DQAMPPPMFRLTDSSSSVKELGKEQYSVVTVGPSHCGSSQSHNNLDVSVRHDRSKTVNER
LYHNAGSSSGGSSGCSFGKNIKEMAGVQSITTDRKRKHIVDTDEYASQPDVIGNKTNQRP
GSTGRSRAAEVHNLSERRRRDRINERMKTLQELIPHCTKTDKLSILDETIDYMKSLKLQL
QVMWMGNGMAAAATAPMMLPGVQPQPFIRQMQSPVQLPRFPVMNNPGIVCQNPIQNQVFS
NWFDRYIGVFPQMQAAPQPVEMLRFGSQAGQQSQQPSAPAKTTDGSR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggaacatcaaggttggaattttgaggagaattgcaacttatccaacaataggagatca
tctttaaggccacaggatgaactagtagagttgttatggcgagatgggcaagtggttctg
cagagccaaactaacagagagcaaacccaagcccaaactgtgaaacatgatcatcatcaa
gaaaccctaagatcccacacctttcttgaggatcaagaaaccgtctcttggttacaatac
cctccatatgaagaccaattcataaccgacggcttctcatctcatttcttctcaaccggt
aatcccctggagagaccagcctcagagatggttaagcacgaggccggtcctgaccctcct
gatcaggccatgcctcctcctatgtttaggttaacggattcatcatcaagtgtcaaggaa
ctaggaaaggaacaatactcggttgtgaccgttggaccgagccattgcggaagcagccaa
tctcataacaatcttgatgtctcagtgcgtcatgatcggagcaaaactgtcaatgaaagg
ctttaccataacgcaggttcatcatcaggtggctcctctggttgcagctttggcaagaac
atcaaagaaatggctggtgtgcaaagcattacaacagaccgtaagagaaaacatatagtg
gacactgatgaatatgcatctcaaccagatgtaataggtaacaaaacgaaccaacgacca
ggatcaacgggcaggagtcgagcagctgaagttcataatctctccgaaaggaggagaaga
gataggatcaatgagagaatgaagactttgcaagaactaatacctcactgcactaaaact
gataaattatcaatattggacgaaaccatagattacatgaagtcacttaagttacaactt
caagttatgtggatggggaatggaatggctgctgctgcgacagctccgatgatgctccct
ggcgtacaacctcagccgttcatccgccagatgcagagcccggtacagttgcctcgattt
ccggttatgaacaatcccggtatagtttgtcaaaatccgatacaaaaccaagttttctcc
aattggtttgatagatacattggcgtattcccacagatgcaggccgcgcctcagccggtg
gagatgctaagatttggttctcaggcgggacagcaaagtcaacaaccgtctgcgccggcg
aagaccaccgacggttctcgttag
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