Brassica oleracea (wild cabbage): 106342225
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Entry
106342225 CDS
T04124
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
boe
Brassica oleracea (wild cabbage)
Pathway
boe00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
boe00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
106342225
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
boe01007
]
106342225
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
boe03016
]
106342225
Enzymes [BR:
boe01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
106342225
Amino acid related enzymes [BR:
boe01007
]
Aminoacyl-tRNA synthetase
Class I (U)
106342225
Transfer RNA biogenesis [BR:
boe03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
106342225
Prokaryotic type
Other AARSs
106342225
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
106342225
NCBI-ProteinID:
XP_013636548
UniProt:
A0A0D3C0L6
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Position
C4:38901501..38908288
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AA seq
1175 aa
AA seq
DB search
MEEVCEGKEFSFPREEENVLSFWTQIDAFKTQLKRTENLPEYIFYDGPPFATGLPHYGHI
LAGTIKDIVTRYQTMTGHHVTRRFGWDCHGLPVENEIDKKLDIKRRDQVLQMGIDKYNEE
CRSIVTRYVEEWEKVITRTGRWIDFRNDYKTMDLPFMESVWWVFAQLFDKNLVYKGFKVM
PYSTGCKTPLSNFEAGQNYKDVPDPEIMVTFPVIGDQDNAAFVAWTTTPWTLPSNLALCV
NAKFVYVKVRNKHNGKVYVVAESRLSALPADKPKASADIKKANPKAKGGAKPDSAADSYE
VLEKFDGASLVGKKYEPLFEYFSDFSSEAFRVVADSYVTDDSGTGIVHCAPAFGEDDYRV
CLENNIIKKGENLVVAVDDDGLFTERITHFSGRYVKDADKDIIEAVKAKGRLVKTGSFVH
SYPFCWRSDTPLIYRAVPSWFVRVELLKEQLLENNKQTHWVPDYVKDKRFHNWLENARDW
AVSRSRFWGTPLPIWISDDGEEIVVMDSVEKLEKLSGVKVFDLHRHHIDHITIPSSRGPD
FGVLHRVEDVFDCWFESGSMPYAYIHYPFENKELFEKNFPGHFVAEGLDQTRGWFYTLMV
LSTALFGKPAFRNLICNGLVLAEDGKKMSKKLRNYPPPLEVIDEYGADAVRLYIINSPVV
RAEPLRFKKEGVLGVVKDVFLPWYNAYRFLVQNAKRLEIEGSGPFVPTNLATLRSSNVLD
QWIHSATQSLVHFVRQEMDGYRLYTVVPYLLKFLDNLTNIYVRFNRKRLKGRTGEDDCHI
ALSTLYNVLLTSCKVMTPFTPFFTETLYQNLRKACEGSEESIHYCSFPEAEGTRDERIEQ
SVTRMMTIIDLARNIRERHKLPLKTPLKEITVVHPDAEFLDDITGKLREYVLEELNVRSL
VPCNDTLKYASLKAEPDFSALGKRLGKSMGLVAKEVKAMSQQDILRFEEAEKVTIAGHTL
ELTDIKIVRVFKRPDGLKETEIDANGDGDVLVILDLRADDSLYEAGVAREIVNRIQKLRK
KSGLEPTDFVEVYIESLDKDVSALRQVLNSQEQYIKDTIGSSLLLSTLMPSHAVILSEES
FQNVSKLSFKISLARPALKFNEEAIIVLYSGDVKFASGLQAYLLSRDHSNLKSEFQEGNG
KITVSCIEKLPVVTVVLGDHLHLTVGDYLLSTTNS
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagtctgcgaagggaaggagttctcatttccccgcgaggaagagaatgtactc
tctttctggactcaaatcgatgccttcaagactcagctcaaacgaaccgagaacctcccc
gagtacatcttctacgacggccctcctttcgccaccggtcttcctcactacggccacatc
ctcgccggtacgatcaaggacatcgtgacgcggtaccagaccatgaccggtcaccacgtc
acgcgtcgattcggctgggactgccacggcctccccgtcgagaacgagatcgataagaag
ctcgatatcaaaaggagagatcaggtgcttcagatggggattgataagtacaacgaagag
tgtaggagcatcgtgactcgctacgtggaggagtgggagaaggtgattactaggactggg
cgttggattgatttcaggaacgactataagacgatggatctgccctttatggagagtgtt
tggtgggtctttgctcagctttttgataagaatcttgtctacaaaggcttcaaggttatg
ccttatagtactggttgtaagacaccgttatccaatttcgaagctggtcagaactacaag
gacgttccagatcctgagattatggtgacgttcccagtcattggtgatcaagataatgct
gcttttgtggcatggactactactccgtggacgcttcctagcaatcttgctttgtgtgtc
aatgccaagtttgtttatgtcaaggttcgtaacaagcacaatgggaaagtctacgttgtt
gctgaatctcgcttgtcagcccttcccgctgataagcccaaggctagtgctgatataaag
aaagcaaatcctaaagccaaaggtggtgctaaacctgacagtgcagctgattcttatgaa
gttttggagaagtttgatggagcttccctggttgggaagaagtatgaacctttgtttgag
tactttagtgatttctcaagtgaggccttccgagtagtagcagatagttatgtcactgat
gacagtggtaccggtattgtccactgtgctcctgcctttggtgaagacgattaccgtgtt
tgtctcgagaacaacatcattaaaaagggtgagaatctagttgtggctgttgatgacgat
gggttgttcactgagagaattacccatttcagtggccggtatgtcaaagatgcagacaag
gatataattgaagccgtgaaggccaaaggcaggcttgttaaaacggggagctttgttcac
tcatatccattttgctggcgatcagacactcctctcatatatagagccgttcccagttgg
tttgtgcgggtggagctgttgaaggaacagttgttagaaaacaataaacagacacactgg
gtacctgattatgtgaaggataaacgctttcacaattggcttgaaaacgcaagggattgg
gccgttagccgaagtagattttggggcacgcctctaccgatatggatcagtgatgatggt
gaggaaattgttgtcatggattctgtcgagaagcttgaaaagctctctggtgtcaaggtc
tttgatctgcatcgtcaccatattgatcacattacaatcccatccagtcgtgggcctgac
tttggtgtgctccatcgtgtagaagatgtttttgattgttggtttgagagtgggtcaatg
ccttacgcgtacatccattatccttttgaaaacaaggagctttttgagaagaatttccct
ggtcattttgtggctgaagggcttgatcaaactcgtggatggttttatactcttatggtg
ctgtcgactgcactatttggaaagccagcatttcgaaatctgatttgcaatggccttgtg
cttgctgaggatggtaaaaagatgagtaagaaattacggaactatccacctcctttggaa
gtcatagatgagtatggagctgatgctgtgcgattgtacatcataaattctccggtcgta
cgtgctgagccactacgcttcaaaaaggaaggagtacttggtgttgtcaaagatgtattt
cttccatggtacaatgcgtatcggttccttgttcagaatgcgaagagacttgagattgag
ggctctggaccatttgttcctactaatctagcaactttacggtcatcaaacgttctcgat
caatggattcactcagctacgcagagtcttgttcattttgtccgccaggagatggatgga
tatcggctttacactgttgttccttatctcttgaagttcctcgacaatctcactaacata
tatgttagattcaaccgcaagaggctaaaaggccggacaggagaagatgactgtcacatt
gctctttcaaccctatacaatgtgctcctcacttcttgcaaagtgatgaccccttttaca
cctttcttcactgagacgttataccagaatctgcggaaagcatgtgaaggttctgaggaa
agcattcattactgcagtttccctgaagcggaaggaacgagagatgagaggattgagcaa
agtgttacaaggatgatgacaatcatcgatcttgctcggaacattcgtgagcgtcacaag
ctacccttgaaaactcctctaaaggaaatcactgtagttcatccagatgcagaattcttg
gatgacataactggaaaactaagagagtatgtcttggaagaacttaatgtaagatctcta
gtgccatgcaatgatactctgaagtatgcgtctctaaaagcagaaccagatttcagtgca
ttgggaaaacggcttggaaagtcaatgggacttgttgccaaagaagttaaagcaatgtct
cagcaagatatcttaagattcgaggaggccgagaaagttactattgctggacacacgctg
gagctaacagatataaagattgtcagggttttcaaacgcccggatggtttgaaggagaca
gagattgatgcaaatggagatggtgatgttttggtgattttggatctacgagcagatgat
tcgttgtatgaagcaggtgttgctcgcgagattgtgaataggatccaaaaactaaggaag
aagtcaggtctggaaccaacagactttgtggaagtgtacattgaatcattggacaaagat
gtatctgcgttgcgacaagttctgaactctcaggaacaatacataaaggatacaattggt
tcctctttgcttctgtcgacgttgatgccatcacatgcagtgatattatctgaagagagt
tttcaaaatgtttcaaagctgtcctttaagataagcttggctagaccagctttgaagttc
aatgaagaagctattattgtcttgtattcaggagatgtgaaatttgcaagcgggctccaa
gcgtacttgttatctcgggaccattctaatttgaaatcagaattccaagaaggaaatggc
aagataactgtaagctgcattgagaagctgccagtggtgactgtggtccttggagaccat
cttcatttgacagtcggggactacttgttgagcacgaccaactcttga
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