KEGG   Brassica oleracea (wild cabbage): 106344980
Entry
106344980         CDS       T04124                                 
Name
(RefSeq) putative DNA glycosylase At3g47830 isoform X1
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
boe  Brassica oleracea (wild cabbage)
Pathway
boe03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:boe00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    106344980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:boe03400]
    106344980
Enzymes [BR:boe01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     106344980
DNA repair and recombination proteins [BR:boe03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     106344980
 Prokaryotic type
     106344980
SSDB
Motif
Pfam: HhH-GPD USP47_C
Other DBs
NCBI-GeneID: 106344980
NCBI-ProteinID: XP_013639717
LinkDB
Position
C1:21517730..21519252
AA seq 297 aa
MSKSRKRKRLLQDDGGDSKSPACNGSTISGGDPYPELLRPTVDECRDVRDALLSLHGFPP
EFASYRRQRLRSLDGHDTQCSVDSDEEEESVLDGLVKILLSQNTTEANSQRAFASLKAAF
PKWEDVSSPILGFDMVLVAEPNSVENAIRCGGLAPKKTVCIKNILSRLQKERGSLCLEYL
RVLTVEEVKTELSHFKGIGPKTVSCVLMFNLQHNDFPVDTHVFEISKALGWVPKTADRNR
TYVHLNHRIPDELKFDLNCLLYTHGKLCSNCKKNAARPKAKVASPDDCPLLGFSGLV
NT seq 894 nt   +upstreamnt  +downstreamnt
atgagcaaatcccggaaaaggaaacgcttactccaagacgacggcggcgactcaaaatct
ccggcttgtaatggatccaccatctccggcggcgatccttatccggaactccttagacct
accgttgacgaatgtagagacgtaagggatgctttgttgtcgctccacgggttccctccc
gagttcgccagttaccgccgtcagagactccgatcacttgatggtcacgatacacagtgt
tcggtggactcggatgaggaggaggagagtgtgcttgatgggcttgttaaaattcttctt
tcacagaataccactgaggccaattctcaaagggcttttgcatctcttaaggctgcgttt
ccgaaatgggaagatgtaagctctccaattttgggctttgatatggttttggttgctgag
ccaaactccgttgagaatgctataagatgtggaggattggccccgaaaaagaccgtctgt
atcaaaaacattttgagccgtttgcagaaagaaagaggcagtttgtgtttggaatatctg
cgcgttttgacggtagaagaagtaaaaactgagctctctcattttaaaggaattggaccc
aaaactgtttcttgtgttctgatgttcaacctccagcacaatgatttcccagtcgacaca
catgtgtttgagatctccaaggcgttaggttgggtcccgaaaaccgcagacaggaacaga
acctatgttcacctcaaccacaggatcccagatgagctcaagtttgatctgaactgtctg
ttatatacacatggtaagctctgcagcaactgcaagaagaatgctgctagaccaaaagct
aaagtagcgtcccctgatgattgcccgcttctggggttttctggtttagtctag

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