Bosea sp. Tri-49: BLM15_01430
Help
Entry
BLM15_01430 CDS
T05753
Name
(GenBank) DNA ligase (NAD(+)) LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
boi
Bosea sp. Tri-49
Pathway
boi03030
DNA replication
boi03410
Base excision repair
boi03420
Nucleotide excision repair
boi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
boi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BLM15_01430
03410 Base excision repair
BLM15_01430
03420 Nucleotide excision repair
BLM15_01430
03430 Mismatch repair
BLM15_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
boi03032
]
BLM15_01430
03400 DNA repair and recombination proteins [BR:
boi03400
]
BLM15_01430
Enzymes [BR:
boi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BLM15_01430
DNA replication proteins [BR:
boi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BLM15_01430
DNA repair and recombination proteins [BR:
boi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BLM15_01430
NER (nucleotide excision repair)
GGR (global genome repair) factors
BLM15_01430
MMR (mismatch excision repair)
DNA ligase
BLM15_01430
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BLM15_01430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
Zn_ribbon_PaaD
DUF4796_N
Motif
Other DBs
NCBI-ProteinID:
AZO76410
UniProt:
A0AAD1A365
LinkDB
All DBs
Position
285072..287222
Genome browser
AA seq
716 aa
AA seq
DB search
MADPVPAPVEDLTPEAARAEHELLGPEIAAANAAYHSDSAPIMDDATFDAKFRRLTALEN
AFPELKGAEALSDKVGAKPSGKFAKIRHRVPMLSLNNAFADEDIADFVTRVRTFLGRKDD
QPIAFTAEPKIDGLSLSLRYEKGELVSAATRGDGEEGEDVTANARTISEIPHRLKGKDVP
DIAEVRGEIYLGHADFAGINQRQREKEEREFANPRNAAAGSLRQLDVSITASRPLRFFAY
AWGEMPELPAPTQFGVVEAFARWGFKTNPLMARCQSVEELLAHYRMIEAQRATLGYDIDG
VVYKVDELALQARLGFVARAPRWAIAHKFPAELATTVLEAIDIQVGRTGALSPVARLKPV
TVGGVVVTNATLHNEDYIRGFDSKGLPIRDGSDIRIGDTVTVKRAGDVIPRVEAVDLAKR
PADAQPYVFPATCPVCGSDAVREHNPRSGKEDAVRRCTGGLICEAQAVERLKHFVSRDAL
DIDGLGDKQIEFFHTDPDLPVKQPADIFTLAERDGANLKKLKDKEGFGATSTKKLFEAID
DRRKPPLNRFIFGLGIRHIGETNARLLARHYGSFEALEAACLAAENPESEERAALDAIDG
VGPTVVEALLQFFAEEHNQQMLARLLGEVTPQPLEAVASSSPVAGQIVVFTGALERMTRD
EAKAMAERLGAKVAGSVSSKTDLLVAGPGAGSKLKDAAKHGVKVIDEAGWFELVGG
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcctgttcccgcacccgtcgaagatctgacgcccgaagccgcgcgcgccgag
catgaattgctcgggcccgagattgctgccgcgaatgccgcctatcacagcgacagcgcg
ccgatcatggacgacgcgaccttcgacgcgaagttccgccgactcactgcgctggaaaac
gccttccccgagctcaaaggggccgaggcgctctccgacaaggtcggtgccaagccctcg
ggcaaattcgccaagatccggcatcgcgtgccgatgctctcgctcaacaatgccttcgcc
gacgaggacatcgccgactttgtgacgagggtcaggaccttcctcggccgcaaggacgac
cagccgatcgccttcaccgccgagccgaagatcgacggactctcgctgtctttgcgctac
gagaagggtgaactggtcagtgccgcgacccgcggcgacggcgaggagggcgaggacgtc
accgccaacgcccgcaccatctccgagattccgcaccggctgaagggcaaggacgtgcct
gatatcgccgaggtgcgcggcgagatttatctcggccatgccgatttcgcggggatcaac
cagcgtcagcgcgaaaaggaggagcgcgaattcgccaatccgcgcaacgccgctgccggc
tcgctgcgtcagctcgacgtctcgatcacggcctcccggccgctacgcttcttcgcctat
gcctggggcgagatgccggagctgccggcgccaacccagttcggcgtggtcgaggctttc
gcgcgctggggctttaagaccaacccgctgatggcgcgctgccagagcgtggaagagctg
ctggcgcattaccgcatgatcgaggcgcaacgcgcgacgctcggctacgacatcgacggc
gtggtctacaaggtcgacgagctcgcgctgcaggcgaggctcggcttcgtcgcgcgcgcc
ccgcgctgggcgatcgcgcacaagttcccggccgagctcgcgaccaccgtgctggaggcg
atcgacatccaggtcgggcgcaccggagcactgtcgccggtggcgcggctgaagccggtg
acggtcggcggcgtcgtcgtcaccaatgcgacgctgcacaatgaggactatatccgcggc
ttcgattcgaaggggctgccgatccgcgacggcagcgacatccgcatcggcgacacggtg
acggtgaagcgcgccggcgacgtgatcccgcgcgtcgaggcggtcgatctcgccaagcgc
ccggcggacgcgcagccttacgtcttcccggcgacctgcccggtctgcggctcggatgcg
gtgcgcgagcacaatccgcgctcaggcaaggaggatgcggtgcgccgctgcaccggtggg
ttgatctgcgaggcgcaggcagtcgagcgattgaagcatttcgtctcgcgcgacgcgctc
gacatcgacgggctcggcgacaagcagatcgagttcttccataccgacccagacctgccg
gtgaagcagccggccgacatcttcacgctggctgagcgcgacggggccaacctcaagaag
ctgaaggacaaggaaggcttcggcgcgaccagcaccaagaagctgttcgaggcgatcgac
gaccggcgcaagccgccgctcaaccgtttcatcttcgggctcggcatccgccatatcggc
gagaccaatgcgcggctactggcgcgccattacggatcgttcgaagccctggaggcggcg
tgcctcgccgccgagaatccggagagcgaggagcgggcggcgctcgatgcgatcgacggc
gtcggcccgaccgtagtcgaggcgctgctccagttcttcgccgaggaacacaaccagcag
atgctcgcccggctgcttggcgaggtcacgccgcaaccgctcgaagcggttgcgtcatcg
agcccggtcgccggccagatcgtcgtcttcaccggcgcgctcgagcgcatgacccgcgac
gaggccaaggcgatggccgagcggctcggcgccaaggtcgccggttcggtctcgtcgaag
accgatctgctggtcgcggggccgggtgccggctcgaagctcaaggacgccgccaagcac
ggcgtcaaggtgatcgacgaggccggctggttcgagctggtcggcgggtaa
DBGET
integrated database retrieval system