Bos mutus (wild yak): 102273939
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Entry
102273939 CDS
T02919
Symbol
EFTUD2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bom
Bos mutus (wild yak)
Pathway
bom03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102273939 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bom03041
]
102273939 (EFTUD2)
Spliceosome [BR:
bom03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102273939 (EFTUD2)
Complex C
U5 SnRNP specific factors
102273939 (EFTUD2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
102273939
NCBI-ProteinID:
XP_005903403
UniProt:
L8I6F5
LinkDB
All DBs
Position
19:complement(30925601..30962285)
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AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEVDEDEDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggatactgacttgtatgacgagtttgggaattacatcggaccagagcttgattctgat
gaagatgatgatgaattgggcagagagaccaaagatcttgatgaggtcgatgaggatgag
gacgacgatgatgtgggcgatcacgacgaagaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccaccgccgaggaggtgtacggccccgaggtggagaccata
gttcaggaggaggacacccagcctctcacagaacccattattaagccagtgaaaaccaag
aaattcactctgatggagcagacgttacctgtcacggtgtacgaaatggatttcttggca
gatctgatggataactcggagctcatcagaaatgtgactctctgtggccatctgcaccac
ggcaagacatgttttgtagattgtttaatagagcagactcacccagaaatcagaaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagaacaagagaggggtgttggc
atcaaaagtactcctgtgacagtggtcttgccagataccaaggggaaatcctacctcttc
aacatcatggacactccaggacacgtgaatttttctgatgaggtcacagcgggcttgcgc
atctcagatggagtggtccttttcatcgatgccgccgagggcgtgatgctgaacacagag
cggctgatcaagcacgcggtgcaggagaggctggcagtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctgaagctgccacccacggatgcttactataagctgcgtcac
attgtcgatgaggtcaacggcttaataagcatgtactccacggatgagaacctgatcctt
tccccgctcctgggcaatgtctgcttctccagctcccagtacagcatctgcttcacgctg
ggctcctttgccaagatctatgctgacaccttcggtgacattaactaccaggagttcgct
aaaagactctggggtgacatctacttcaaccctaagacgcggaagttcaccaaaaaggcc
ccaaccagcagctcccagaggagttttgtggagtttatcttggagcccctctataagatc
ctcgcccaggtcgtgggtgatgtggacaccagcctcccgaggaccctggatgagcttggc
atccacctgaccaaggaggagctgaagctgaacatccgccccctgctcaggctggtttgc
aaaaaattctttggcgagttcacaggctttgtggacatgtgtgtgcagcatatcccgtct
ccaaaggtgggcgccaagcctaaaatcgagcacacctataccggtggtgtggactctgac
cttggcgaggccatgagtgactgtgaccccgacggtcccctgatgtgccacacgaccaag
atgtacagcacagatgatggagttcagtttcatgcctttggccgagtgctaagtggcacc
atccatgctgggcagcctgtgaaggtactgggggagaactacaccctggaggatgaggaa
gactcccaaatatgcaccgtgggccgcctttggatctccgtggccaggtaccacatcgaa
gtgaaccgtgttcctgctggcaactgggtcctgatcgaaggtgtcgaccaaccaattgtg
aagacagcaaccataaccgaaccccgaggcaacgaggaggctcagatcttccggcccttg
aagttcaacaccacatctgttatcaagattgccgtggagccagtcaatccctctgagctg
cccaagatgctggacggcctgcgcaaggtcaacaagagctacccatccctcaccaccaag
gtggaagagtctggcgagcatgtgatcctgggcactggagagctctacctggactgcgtg
atgcacgatttgcggaagatgtactcggagatcgacatcaaggtggctgaccctgttgtc
acattctgtgagacggtggtggaaacgtcgtccctcaagtgtttcgccgaaactcccaat
aagaagaacaaaatcaccatgatcgccgagcctctggagaagggccttgcagaggatata
gagaacgaggtggtccagatcacgtggaacaggaagaagctgggagagttctttcagacc
aagtatgactgggatctgctggctgcccgttccatctgggctttcggcccggatgccact
ggccccaacatcctggtggatgataccctgccctcggaggtggacaaggctcttctcggc
tcagtgaaggacagcatcgttcaaggtttccagtggggaaccagggaggggcccctctgt
gatgagttgattcggaatgtcaagtttaagatcctggatgcagtggttgcccaggagccc
ctgcaccggggcgggggccagatcatccccacagcccggagagtcgtctactcagccttc
ctcatggccacccctcgtctgatggagccctactacttcgtcgaggtccaggcccccgcg
gattgtgtctctgctgtctacacggtcctggccaggcgcaggggacacgtgactcaggat
gcacccatcccaggctctcctctgtacaccatcaaagctttcattccagccatcgactct
ttcggctttgagactgatctgcgaactcacacgcagggccaggccttttccttgtctgtc
ttccaccactggcagattgtacccggtgaccctctggacaagagcattgtcatccgcccc
ttggagccacagccagctccccacctggcccgagaattcatgatcaaaacccgtcgtaga
aagggcctgagtgaggatgtgagcatcagcaagttcttcgatgatcctatgttgctggag
ctcgccaagcaggatgtggtgctcaactaccccatgtga
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