Bos mutus (wild yak): 102278109 Help Entry 102278109         CDS       T02919                                  Symbol THBS1 Name (RefSeq) thrombospondin-1 isoform X2   KO K16857   thrombospondin 1 Organism bom  Bos mutus (wild yak) Pathway bom04015   Rap1 signaling pathway bom04115   p53 signaling pathway bom04145   Phagosome bom04148   Efferocytosis bom04151   PI3K-Akt signaling pathway bom04350   TGF-beta signaling pathway bom04510   Focal adhesion bom04512   ECM-receptor interaction bom04820   Cytoskeleton in muscle cells bom05144   Malaria bom05165   Human papillomavirus infection bom05205   Proteoglycans in cancer bom05206   MicroRNAs in cancer bom05219   Bladder cancer Brite KEGG Orthology (KO) [BR:bom00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     102278109 (THBS1)    04350 TGF-beta signaling pathway     102278109 (THBS1)    04151 PI3K-Akt signaling pathway     102278109 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     102278109 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     102278109 (THBS1)    04148 Efferocytosis     102278109 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     102278109 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     102278109 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     102278109 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     102278109 (THBS1)    05205 Proteoglycans in cancer     102278109 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     102278109 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     102278109 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     102278109 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:bom04131]     102278109 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:bom00536]     102278109 (THBS1) Membrane trafficking [BR:bom04131]  Endocytosis   Phagocytosis    Opsonins     102278109 (THBS1) Glycosaminoglycan binding proteins [BR:bom00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    102278109 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS EGF_CA Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Laminin_G_1 Motif Other DBs NCBI-GeneID:  102278109 NCBI-ProteinID:  XP_014338470 LinkDB All DBs Position 10:complement(72944889..72960683) Genome browser AA seq 1170 aa AA seqDB search MGLAWGLGVLLLLHACGSNRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDKKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAVERKDHSGQVFSVV SNGKAGTLDLSLTVQGKQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLASIARLRIAKGGVNDNFQGVLQNVRFVFGTTPEDILRNKGCSSSTSVFV TLDNNVVNGSSPAIRTDYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELANELRRPPLCYHNGVQYRTGDEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSVTCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGKARE TKACQKDSCPINGGWGPWSPWDICSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDVTENQI CNKQDCPIDGCLSNPCFAGVQCTSYPDGSWKCGACPPGYSGDGVECKDVDECKEVPDACF NHNGEHRCENTDPGYNCLPCPPRFTGSQPFGRGVEHATANKQVCKPRNPCTDGTHDCNKN AKCNYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLLCVANATYHCRKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQKDTDMDGVGDQCDNCPLEH NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDQDKVPDIDDICPENVDISETDFRRF QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL WHTGNTSGQVRTLWHDPRHIGWKDFTAYRWHLSHRPKTGFIRVVMYEGKKIMADSGPIYD KTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactcggtgtcctgctcctgttgcatgcctgcggctccaaccgc attccagagtctgggggagacaacagtgtgtttgacatctttgaactcaccggagctgcc cgcaagggctctgggcgccgactggtgaagggccctgacccttctagcccagctttccgc atcgaggatgccaacctgatcccccctgtgcctgacaagaagttccaagacctagtggat gctgtgcgggcggagaaaggtttcctcctcctggcctccctgaggcaaatgaagaagacc cggggtaccctgctggctgtggagcggaaagaccactctggccaggtcttcagcgtggtc tccaatggcaaggcgggcaccctggacctgagcctgaccgtgcaggggaagcagcatgtg gtgtcggtggaagaagcactcctggcgactggccagtggaagagcatcaccctgtttgtg caggaggacagggcccagctgtacatcgactgtgagaagatggagaatgcggagctggat gtccccatccagagcatcttcaccagggacctggccagcatcgccaggctccgcattgcc aaaggaggtgtcaatgacaatttccagggggtgctgcagaatgtaaggtttgtctttgga accacaccagaagacatcctcaggaacaaaggctgctccagctctaccagtgtctttgtc acccttgacaacaatgtggtgaatgggtccagccctgccatccgcaccgactacattggc cacaagacaaaggacctgcaagccatctgtggcatctcatgtgacgagctgtccagcatg gtcctggagctcaggggtctacgcaccatcgtgaccacgctgcaggacagtatccgcaaa gtgaccgaagagaacaaagagctggccaacgagctgaggaggcccccactctgctaccac aacggagtgcagtacaggactggcgacgagtggacggtggacagctgcactgagtgtcgc tgccagaactcagttaccatctgcaaaaaagtgtcctgtcccatcatgccctgctccaat gccacagttccagatggagaatgctgcccacggtgctggcccagcgactctgcagacgac ggctggtccccgtggtctgagtggacctcttgctctgtgacctgtggcaatggaatccag cagcgtggccgctcctgcgacagcctcaacaacagatgcgagggctcctctgtgcagacg cggacctgccacatccaggagtgtgacaagagatttaaacaggatggcggctggagccac tggtccccatggtcatcttgctccgtaacatgtggagacggtgtgatcacaaggatccgg ctctgcaactcccccagcccccagatgaatgggaagccgtgtgagggcaaagcccgggag accaaagcctgccagaaagactcctgccccatcaatggaggctggggaccttggtcacca tgggacatctgttctgtcacctgtggaggaggggtacagaaacgtagccggctctgcaac aaccccacaccccagtttggaggcaaggactgcgttggtgatgtgacagaaaaccagatc tgcaacaagcaggactgtcccattgacggatgcctgtccaatccctgctttgctggtgtc cagtgtaccagctaccctgatggcagctggaagtgtggtgcctgtcccccaggctatagt ggagatggagtcgagtgcaaagacgttgatgagtgcaaagaagtccctgatgcctgcttc aaccacaatggagagcacaggtgtgagaacacagaccccggctacaactgcctgccctgc ccaccgcgcttcactggctcgcagccctttggccggggcgtggaacatgccaccgccaac aagcaggtatgcaagccccgaaacccctgcacagacgggacacacgactgcaacaagaac gccaagtgcaactacctgggccactacagtgaccccatgtaccgctgcgagtgcaagcct ggctacgccggcaacggcatcatctgcggggaggacacagacctggacggctggcccaat gaggacctgctgtgcgtggccaatgcaacttaccactgcagaaaggacaattgccccaac cttcccaactcagggcaggaagactatgacaaggatggaatcggcgatgcctgcgatgat gacgatgacaatgataagattccagatgacagggacaactgtccattccattacaaccca gcccagtacgactatgacagagatgacgtgggagaccgctgtgacaactgcccctacaac cacaacccagaccaggctgacacagataacaatggggaaggagacgcctgcgcagctgac attgatggggacggtatcctcaatgaacgggacaactgccagtatgtctacaatgtggac cagaaagacactgacatggacggggttggtgatcagtgtgacaactgccccctggaacac aatccagaccagctcgactctgactcggaccgcattggagacacctgtgacaacaatcag gatattgatgaagacggccaccagaacaatctggacaactgtccctacgtgcccaacgcc aaccaggctgaccatgacaaggatggcaaaggcgatgcctgtgaccatgatgacgacaat gatggcattcctgatgaccgggacaactgcaggctggtgcccaatcctgaccagaaggac tctgatggtgatggtcgaggtgatgcttgcaaagatgattttgaccaggacaaggtgcca gacattgatgacatctgtcccgaaaatgttgatatcagtgagactgatttccgccgattc cagatgattcctctagatcccaaagggacatcccagaatgaccctaactgggttgtacgc catcagggtaaagaactcgtccagactgtcaactgtgaccctggacttgctgtaggttat gacgaatttaacgccgtggacttcagtggcaccttcttcatcaacaccgagagggacgac gactatgccggctttgtgtttggctaccagtccagcagccgcttctatgttgtgatgtgg aagcaagtcactcagtcctactgggacaccaaccccacgagggctcaggggtactctgga ctttccgtgaaggttgtaaactccaccacggggcctggcgagcacctgcggaatgccctg tggcacacaggaaacacctctggccaggtgcgcacactgtggcatgaccctcgtcacatt ggctggaaagatttcactgcctacagatggcatctgagccacaggccaaagacaggtttc atcagagtggtaatgtatgaagggaagaaaatcatggctgactcaggacccatctatgac aaaacctatgctggtgggcggctaggcttgttcgtcttctctcaagaaatggtgttcttc tccgacctgaaatatgaatgcagagactcctaa

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