Bos mutus (wild yak): 102285660
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Entry
102285660 CDS
T02919
Symbol
APAF1
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
KO
K02084
apoptotic protease-activating factor
Organism
bom
Bos mutus (wild yak)
Pathway
bom01524
Platinum drug resistance
bom04115
p53 signaling pathway
bom04210
Apoptosis
bom04215
Apoptosis - multiple species
bom05010
Alzheimer disease
bom05012
Parkinson disease
bom05014
Amyotrophic lateral sclerosis
bom05016
Huntington disease
bom05020
Prion disease
bom05022
Pathways of neurodegeneration - multiple diseases
bom05134
Legionellosis
bom05152
Tuberculosis
bom05160
Hepatitis C
bom05161
Hepatitis B
bom05162
Measles
bom05164
Influenza A
bom05168
Herpes simplex virus 1 infection
bom05169
Epstein-Barr virus infection
bom05200
Pathways in cancer
bom05222
Small cell lung cancer
bom05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
bom00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
102285660 (APAF1)
04215 Apoptosis - multiple species
102285660 (APAF1)
04115 p53 signaling pathway
102285660 (APAF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
102285660 (APAF1)
09162 Cancer: specific types
05222 Small cell lung cancer
102285660 (APAF1)
09172 Infectious disease: viral
05161 Hepatitis B
102285660 (APAF1)
05160 Hepatitis C
102285660 (APAF1)
05164 Influenza A
102285660 (APAF1)
05162 Measles
102285660 (APAF1)
05168 Herpes simplex virus 1 infection
102285660 (APAF1)
05169 Epstein-Barr virus infection
102285660 (APAF1)
09171 Infectious disease: bacterial
05134 Legionellosis
102285660 (APAF1)
05152 Tuberculosis
102285660 (APAF1)
09164 Neurodegenerative disease
05010 Alzheimer disease
102285660 (APAF1)
05012 Parkinson disease
102285660 (APAF1)
05014 Amyotrophic lateral sclerosis
102285660 (APAF1)
05016 Huntington disease
102285660 (APAF1)
05020 Prion disease
102285660 (APAF1)
05022 Pathways of neurodegeneration - multiple diseases
102285660 (APAF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
102285660 (APAF1)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
102285660 (APAF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
APAF1_C
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
NB-ARC
EIF3I
Beta-prop_WDR36-Utp21_2nd
WHD_APAF1
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
CARD
Beta-prop_RIG_2nd
Beta-prop_WDR41
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
WD40_like
RMC1_N
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
WD40_RFWD3
Beta-prop_VPS8
Beta-prop_DCAF12
Ge1_WD40
Beta-prop_WDR11_2nd
CARD_2
PEP5_VPS11_N
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_ACSF4
Beta-prop_IFT140_2nd
AAA_16
Utp8_b_propeller
Beta-prop_RSE1_2nd
AAA_22
ATPase_2
NPHP3_N
nSTAND6
AAA_18
Hira
DUF2677
NACHT
nSTAND1
Motif
Other DBs
NCBI-GeneID:
102285660
NCBI-ProteinID:
XP_070226411
LinkDB
All DBs
Position
5:complement(11462270..11551505)
Genome browser
AA seq
1249 aa
AA seq
DB search
MDAKARNCLLQHREALERDIKTSYIMDHMISNGVLTVSEEEKVKNEPTQRQRAAMLIKMI
LKKDNHSYISFYNALLHEGYKDLAALLHGGIPVVSSSDGKDSVSGITSYVRTVLCEGGVP
QRPVVFVTRKKLVNAIQQKLSKLNGEPGWVTIYGMAGCGKSVLAAEAVRDHSFLEDCFPG
GVHWVSVGKQDKSGLLMKLQNLCARLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSLL
ILDDIWDPWVLKAFDNQCQILLTTRDKSVTDSVMGPKYVVPVESGLGKEKGLEILSLFVN
MKKADLPEQAHSIIQECKGSPLVVSLIGALLRDFPNRWEYYLRQLQNKQFKRIRKSSSYD
YEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDLETEEVEDILQEFVN
KSLLFCDRNGKSFLYYLHDLQVDFLAEKNRSQLQDLHKKMVTQFQRHHQLYSLSPDQEDC
MYWYSFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDGID
CENFQEFLSLNGHLLGRQPFPNIVQLGLCELETSEVYRQAKLQAKQEVDNGMLYLEWVNK
KNMKNLSRLVVRPHTDAVYHACFSEDGQRIASCGADKTLQVFKAETGEKLLEIKAHEDEV
LCCAFSADDKFIATCSVDKKVKIWNSMTGELVRIYDEHSEQVNCCHFTNNSNHLLLATGS
NDYFLKLWDLNQEECRNTMFGHTNSVSHCRFSPDDQVLASCSADGTLKLWDVKSANERKS
INVKQFFLNSEEPQEDLEVIVKCCSWSADGAKIMVAAKNKVFLFDIHSSGLLAEMHMGHH
SAVQYCDFSPHNHLAVVALSQYCVELWSMDSGLKVADCRGHLSWVHCVMFSPDGSSFLTS
SDDQTIRLWETKKVCKNSATVLKQEIDVVFQENEVTVLAVDNIRRLQLINGNTGQIDYLT
EAQVSCCCLSPHLQYLAFGGEDGAIQILELLNNRIFQSRNGHKTTVRHIQFTADGKTLIS
SSDDSAVQIWNWQSEDPFFLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWNIITRRIEKD
FVCHQDTVLSCDISSDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSSFSVNNS
LLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDTKMLVSAGGYL
KWWNVVTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILKILE
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaagctcgaaattgtttgcttcaacatagagaagccttggaaagggacatc
aaaacatcctacattatggatcacatgattagtaatggagttttaacagtgtcagaggag
gaaaaagtgaaaaatgagcccacccaacggcaacgagcagctatgctaattaaaatgata
cttaaaaaagataatcattcctatatatcgttctacaatgctctacttcatgaaggttac
aaagatcttgctgcccttctgcatggtggcattcctgttgtctcttcttccgatggcaaa
gattcagttagtggaataacttcgtatgtaaggacagtcctgtgtgaaggtggagtacca
cagaggcccgttgtttttgttactaggaagaagctagtgaatgcaattcagcagaagctc
tccaaactgaatggtgaaccaggatgggtcaccatatatgggatggcaggttgtgggaag
tctgtattagctgcagaagctgttcgagatcattctttcctagaagattgtttcccagga
ggcgtgcattgggtgtcagttgggaaacaggacaaatccgggcttctgatgaaactacag
aacctttgtgcacgattggatcaggatgagagcttctcccagaggcttccacttaatatt
gaagaggctaaagaccgtctccgcattctgatgctgcgcaaacatccaaggtctttattg
atcttggatgatatttgggatccttgggtgttaaaagcttttgacaatcagtgtcaaatt
cttctcacaactagagataagagtgttacagattcagtgatgggtcctaaatatgtagtg
cctgtggagagtggtttaggaaaagaaaaaggacttgaaattttatccctttttgttaat
atgaagaaagcagatttgccagaacaagctcacagtattatacaagaatgtaaaggttcc
cctcttgtagtatctttaattggtgcacttttacgagattttcccaaccgctgggagtac
tacctcaggcaacttcagaataagcaatttaagaggataagaaaatcttcatcttatgac
tatgaggctctagatgaagccatgtctataagtgttgaaatgctcagagaagacatcaaa
gattattacacagatctttccatcttacagaaagatgttaaggtgcctacaaaggtgtta
tgtatcctctgggacttggaaacggaagaagttgaagacatattacaggaatttgttaat
aagtctctcttgttctgtgaccggaatggaaaatcatttctttattatttacatgatctg
caagtagatttccttgctgaaaagaatcgcagccagcttcaggatctccacaagaagatg
gtcactcagttccagagacatcaccagctatattctctttcaccagatcaggaggattgc
atgtattggtacagttttctggcctatcacatggccagtgctaatatgcacaaagaactg
tgtgctttaatgttttccctggattggattaaagcaaaaacggaacttgtaggccctgct
catctgattcatgaatttgtggaatacaggcatatattggatgaaaaggatggtatagac
tgtgagaatttccaggagtttttatctttaaatggacatcttcttggacgacagccattt
cctaatattgtgcaactgggcctctgtgaactggaaacttcagaggtttatcggcaagct
aagctgcaggccaagcaggaggtcgataacggaatgctttacctggagtgggtaaacaaa
aaaaacatgaagaacctctcccgcttggttgtccgcccccatacagatgctgtttaccat
gcttgcttttctgaagatggtcaaagaatagcgtcttgtggagctgataaaactttacag
gtattcaaagctgaaacaggagagaaacttctagaaatcaaggctcatgaggatgaagtg
ctttgctgtgcattctctgcagatgacaaatttatagcaacctgctcagtggataaaaaa
gtgaagatttggaattcaatgactggggaactagtgcgtatctatgatgagcactcagag
caagtcaattgctgccacttcaccaacaacagtaatcaccttctcttagccactggttca
aatgactacttccttaaactctgggatctgaatcaagaagaatgtcgaaataccatgttt
ggccatacaaattcggtcagtcactgcagattttcaccagatgatcaggttttggccagt
tgttcagctgatggaacattaaagctttgggatgtgaaatctgcaaatgagaggaaaagc
attaatgtgaagcaattcttcctgaattcagaggagcctcaggaggatctggaagtgata
gtgaaatgctgttcgtggtctgctgatggtgctaagataatggtggctgcgaaaaataaa
gtctttctttttgacattcactccagtggcctgttggcagaaatgcacatgggccatcat
agtgctgtccagtactgtgacttctccccccacaaccatttggcagtggtggctttgtcc
cagtactgtgtggagttgtggagtatggactcaggtttaaaagtagctgattgcagagga
catttaagttgggtccattgtgtgatgttttctcctgatggatcatcgtttttgacatct
tctgatgaccagacaatcaggctctgggagacaaagaaagtatgtaagaactctgctaca
gtgttaaagcaagaaatagatgttgtgtttcaagaaaatgaagtgacggttcttgcagtt
gacaatataagacgtctgcaactcattaatggaaacacaggtcagattgattacctaact
gaagctcaagtgagttgctgttgtttaagtccacatcttcagtaccttgcattcggaggt
gaagatggagccattcagattttagaactcctgaacaacagaatcttccaatccagaaat
gggcacaagaccactgttcggcacatccagttcacagctgatggaaagactcttatctca
agctctgatgattctgcagttcagatatggaactggcaatcagaggaccctttctttctc
caagcccaccaggaaacagtgaaagacttcagactcttgaaaaattcaagacttctttcc
tggtcatttgatggaacagtaaaggtatggaatattattaccagaagaatagaaaaagat
ttcgtgtgtcaccaggatacagttctttcttgtgatatttcctctgatgctactaagttt
tcttctacctctgctgacaagactgcaaagatttggagttttgaactcctttctcctctt
catgaattgagaggccacaaaggctgtgtgcgctgctcttccttctctgtgaacaatagc
ttgttggcgactggagacgacaatggagaaatcaggatatggaatgtctcaaatggtgag
cttcttcatttgtgtgctccgatttcagtagaagaaggagctgctactcatggaggctgg
gtgaccgacctttgcttttctccagacaccaaaatgcttgtttctgctggaggatatctc
aagtggtggaatgttgtcactggggaatcctcacagaccttctacacaaacggaaccaat
cttaagaaaatacacgtgtcccctgacttcaaaacatatgtgactgttgataatcttggt
attttatatattctaaagattttagagtaa
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integrated database retrieval system
