Rhodophyticola sp. CCM32: E2K80_10930
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Entry
E2K80_10930 CDS
T05925
Name
(GenBank) efflux RND transporter permease subunit
KO
K18138
multidrug efflux pump
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo01501
beta-Lactam resistance
boo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E2K80_10930
01503 Cationic antimicrobial peptide (CAMP) resistance
E2K80_10930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boo02000
]
E2K80_10930
01504 Antimicrobial resistance genes [BR:
boo01504
]
E2K80_10930
Transporters [BR:
boo02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
E2K80_10930
Antimicrobial resistance genes [BR:
boo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E2K80_10930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
MMPL
DUF6286
Motif
Other DBs
NCBI-ProteinID:
QBY01174
UniProt:
A0A4P7JEJ1
LinkDB
All DBs
Position
complement(2253737..2256793)
Genome browser
AA seq
1018 aa
AA seq
DB search
MNMSVWAIRQPVPSLALFLVLMVLGMVGFARLPVTQFPNIDIPIITVNVGQAGAAPSEIT
NQIIRPIEDAVSDVSGVRHVQATATDSVANITIEFELETNTDRALNDIKDAVTSVEGELP
EAATEPVIQRLDVTGQPILTYAVSNPTISIEALSYFVDDVVARDLQSVDGVGQVTRIGGA
EREIRVDLAPDRLLALGLSASGVNDQLRQSNINLGGGRGDLAGQEYSIRTLGSAETLHQL
AATPITLPSGPTIRLDQIATVTDGAAEVRNFAMLDGQPVVAFGVFRSTGASDLLAGDGVK
HRLEEMAADYPDVTFSLIDDATIYTEGNYHSAMETLYEGAALAIIVVMLFLWNWRATVIT
AIALPLSIIPTFIVMYALDFSLNTVSLLGITLVTGILVDDAIVEIENIVRHIRMGRPAYE
ATEEAASEIGLTVIAISFTIVAVFAPVSFMSGIAGQYFRQFGLTVAVAVLFSLLVARLIT
PMIAAHFLRDGVAPEEEERDGVLMRTYMRILRWTLHNRAATLALGFVIFAASIFSATLLP
TEFIPAADTGRSNISVELPPGATLEETRVVSRGTTGLLADIPEVENIFVHGGEGSINTAR
MMVNLGSKSDRDRSLFEIEDEISERLLGVPDVRLHVLNDNGERDIQISVLGDSEAAANAA
AITLAAQINDLDMVENASSTAALTRPEIQITPRPELAAERGVTAVALANTIRIATIGDTD
ENTARFNAEERQIPIVVRIAEDVRRDLFLMQGQRVPSANGSDVPLGVIADVALSTGPAMI
DRYDRQYRTLVEADLAPGALLGPANAASLSVPVALDMPEGTSIQSAGDAEIMGDVFTSFG
LAMGAGILLVYVVLVLLFSSFLTPVTILLSLPLAIGGAIFALYILDYAIGLSVVIGFLML
MGIVTKNAIMLVEFALQGMAEGMDKNSAMIEAGHKRARPIIMTTIAMTAGMVPSALALGE
GGEFRSPMAVAVIGGLLLSTLLSLLFVPSMFSLINGLRVRLRRGLVSVLGANQPKPAE
NT seq
3057 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgtctgtgtgggccattcgccaaccggtcccctctctggcgctgtttctggtt
ctgatggttctgggtatggttggctttgcccgattgccggtgacgcaattccccaatatc
gacattccgatcatcaccgtgaatgtcggtcaggcgggggcggctccgtcagagatcacc
aatcagatcatccgccctattgaggatgcggtgtcggatgtgtccggcgtgcgccatgtt
caggccactgccacggattcagttgcgaatatcaccatcgagttcgaacttgagacgaat
acagaccgcgcgctgaacgatatcaaagacgcggtgacaagcgtggaaggggaactgccc
gaggcggcaacagagcctgtgatccagcgtctggacgtgaccgggcagcccattctgacc
tatgcggtcagcaaccccacgatctcgatcgaggcactgtcgtattttgtggatgatgtg
gtggcccgcgatctgcaatccgtcgatggtgtggggcaggtgacccgtatcggcggggca
gagcgtgaaatacgcgtggaccttgcccccgaccgcctgctggcactggggctcagcgca
tccggggtcaatgaccagcttcgccagtcgaatatcaatcttggcggcgggcgtggcgat
ctggcggggcaggaatacagcatccgcacccttggcagcgcggaaacactgcaccagctg
gccgcaaccccgatcacccttcccagtggccccacgatccggcttgatcagattgccacg
gtcaccgatggcgcggccgaggtgcggaatttcgcgatgctggacgggcagccggtcgtg
gcctttggggtgttccggtccaccggcgccagcgacctgctggccggggatggcgtcaag
caccggctggaagagatggcggcggactatcccgatgtcacgttttcgctgattgacgat
gccacgatctataccgaaggcaattatcacagcgcgatggaaacgctgtatgaaggggcc
gctttggcgatcatcgtcgtgatgctgtttctgtggaactggcgggcgacggtgatcacc
gcaattgccctgcccttgtcgatcattcccacattcatcgtcatgtatgcgctggatttc
tcgctgaacacggtcagccttctggggatcacgctggtaaccggcattctggtggatgat
gccattgtcgagattgaaaacatcgtcaggcatattcggatgggcaggcccgcctatgag
gccacggaagaggccgcaagcgagatcgggctgacagtgatcgcgatcagcttcaccatt
gttgcggtgtttgcgccggtcagtttcatgtcggggattgccgggcagtatttccggcaa
ttcgggttgacggtcgcggttgcggtgctgttctcgctgctggtggcgcgcctgatcacg
ccgatgatcgccgcccatttcctgcgtgacggggtcgcgccggaagaggaagaaagagac
ggggtgctgatgcgcacctatatgcgaatcctgcggtggaccttgcataaccgggccgcg
acccttgctctggggtttgtcattttcgcggcgtcgatcttttccgcaacccttctgccg
accgagttcatccccgccgcagataccggtcgcagcaatatttcggtggaactgccgccc
ggggcgactctggaggaaacccgtgtcgtctctcgcgggaccaccggacttctggcggat
atcccagaggtggaaaacatctttgtccatggtggcgagggcagcatcaataccgcgcgg
atgatggtcaatcttggctcgaaaagtgaccgtgaccggtccctcttcgagatcgaggat
gagatttcagagcggcttctgggtgtgccggatgtgcggctgcatgtgctcaatgacaat
ggtgaacgggatatccagatcagtgttcttggggatagtgaagctgcggcaaatgctgct
gcgatcacgctggccgcgcagatcaatgatctggatatggttgaaaacgcctcctccacg
gcggcgctcacccgtccggaaatccagatcacgccaaggccggaactggccgcggaacgc
ggtgtgacagcggtggccctggccaatacgatcaggatcgccacgatcggggataccgat
gaaaacaccgcccggttcaacgccgaggagcggcagatccccatcgtcgtgcgtatcgcc
gaagatgtgcggcgcgatctgttcctgatgcaggggcagcgggtgccaagtgccaatggc
agtgatgtgcctctgggggtgattgctgatgttgccctgtcaacggggcccgcgatgatt
gaccgctatgaccggcagtatcgcacgctggtcgaggccgatcttgcccccggcgcgctg
cttggccccgcaaatgccgcgtcgctttcggtgcccgtggcgctggacatgcccgaaggc
acgtctattcaaagcgcgggcgatgcagagatcatgggcgatgtcttcaccagtttcggc
ctggccatgggggcgggcatattactggtctatgtggtgctggtgttgttgttctcaagc
ttcctgacaccggtgacgattctgttgtcgctgcctctggccatcggcggggcgatcttt
gccctgtatattctggattacgccattggcctgtcggttgtgatcggctttctgatgctg
atggggatcgtcaccaaaaacgccatcatgctggttgagtttgcgcttcagggcatggcc
gaggggatggacaagaacagtgccatgatcgaggcgggccacaaacgggcgcggccgatc
atcatgaccacgattgcgatgaccgcaggcatggtgcccagtgcgcttgccctgggcgaa
gggggtgagtttcggtcgccgatggccgttgccgtgatcggcgggctgttgctgtcaacg
ctgctgtccctgctgttcgtgccgtcgatgttcagcctcataaacggtctgcgggtcaga
ttgcgccgggggctggtcagcgttctgggcgcgaaccagcccaaacctgcagagtga
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