Rhodophyticola sp. CCM32: E2K80_10935
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Entry
E2K80_10935 CDS
T05925
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K03585
membrane fusion protein, multidrug efflux system
Organism
boo
Rhodophyticola sp. CCM32
Pathway
boo01501
beta-Lactam resistance
boo01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
boo00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E2K80_10935
01503 Cationic antimicrobial peptide (CAMP) resistance
E2K80_10935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
boo03036
]
E2K80_10935
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
boo02000
]
E2K80_10935
01504 Antimicrobial resistance genes [BR:
boo01504
]
E2K80_10935
Chromosome and associated proteins [BR:
boo03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
E2K80_10935
Transporters [BR:
boo02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
E2K80_10935
Antimicrobial resistance genes [BR:
boo01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
E2K80_10935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YknX_C
BSH_RND
Beta-barrel_RND_2
CzcB_C
BSH_CusB
RND-MFP_C
BSH_YknX
DUF4407
DUF1192
HH_YBHG
DUF3584
ATG14
Motif
Other DBs
NCBI-ProteinID:
QBY02741
LinkDB
All DBs
Position
complement(2256790..2257788)
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AA seq
332 aa
AA seq
DB search
MYPQVNGYTIDAMYFDIGDTVSEGDVLARLNSQTLEAQVAQAEAELARAEAGVSQAESQI
ASARASLTEATSVLSRAEQLRSSGTGTQANLDQATASERTARATLASVTDGLAVAQAQQQ
QVQAQLDIAQLNLDHAAIMAPVDGLISARNGRLGAIAASGGEPIFRLIVGSRIEVEAEVL
ETAISGVGQDSDVTLDIAGLGPVQGQVRLISPTVDPVTRLGIVRISIPPTQALRAGLFAS
GWIITERRTSLSVPTTAVLSDADGAYVFVVADDRLSRREISPGLIWEGQREVLDGLAEDE
VVVARAGAFFSDGDVVTPVFVDEQSEIAETGE
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atctatccgcaggtcaacggatatacgattgacgcgatgtatttcgacattggcgacacg
gtttcagaaggggatgtgctggcccggctgaacagtcagacgctggaggcgcaggtggcc
caggccgaggcggaactggcccgggccgaggccggtgtcagtcaggcggaaagccagatc
gcgtcggcgcgcgcctccctgaccgaggccacatctgtgctgagccgggccgagcaactg
cgttcaagcggcaccggcacccaggcaaatctggatcaggccaccgcctctgaacgcacg
gcgcgcgccaccctggcctcggtcaccgacgggctggccgtggcccaggcccagcagcaa
caggtgcaggcacagttggacattgcacagcttaatctggatcacgcggcgatcatggcg
ccggttgatggcttgatctcggccagaaacggccgtcttggggcgattgccgcctcggga
ggggagccgattttccggctgattgtcgggagccgtatcgaagtggaggccgaggttctg
gaaaccgcgatcagcggggtcgggcaggacagcgatgtcacgcttgatatcgcggggctt
gggccggtccagggccaggtcaggctgatctctccgacggtcgatccggtcacccggctg
ggcatcgtgcggatcagcattccacccacgcaagcgctgcgcgcggggctttttgccagc
ggctggatcatcaccgagcgccgcacatcgttgagcgtaccgaccaccgcggttctgagt
gatgcggatggggcttatgttttcgtggtggccgatgacaggctttcacggcgcgagatc
tcccccggtctgatctgggaagggcaacgcgaagtgctggacgggctggccgaggatgag
gttgtcgtggcccgcgcgggggcgttcttttcggatggggatgttgtgacgccggtcttt
gtcgatgaacaaagcgagatcgcggagaccggcgaatga
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