Bipolaris oryzae: COCMIDRAFT_100725
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Entry
COCMIDRAFT_100725 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
bor
Bipolaris oryzae
Pathway
bor00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
COCMIDRAFT_100725
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
bor01007
]
COCMIDRAFT_100725
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bor03016
]
COCMIDRAFT_100725
Enzymes [BR:
bor01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
COCMIDRAFT_100725
Amino acid related enzymes [BR:
bor01007
]
Aminoacyl-tRNA synthetase
Class I (U)
COCMIDRAFT_100725
Transfer RNA biogenesis [BR:
bor03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
COCMIDRAFT_100725
Prokaryotic type
Other AARSs
COCMIDRAFT_100725
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
19117732
NCBI-ProteinID:
XP_007690027
JGI:
Cocmi1_100725
UniProt:
W6Z7C4
LinkDB
All DBs
Position
Unknown
AA seq
1079 aa
AA seq
DB search
MSIDFPREEERVLARWKEIDAFLRQVELSKGKEPYTFYDGPPFATGLPHYGHLLASTIKD
IIPRYWSMKGRYVERRFGWDTHGVPIEYEIDKELGMSGRDAVREIGIAKYNEKCRAIVMR
YAAEWRTTIDRLGRWIDFDNDYKTMDTNFMESEWWVFKRLFDKGAVYRGYKVMPYSTALA
TPLSNFEASQNYKDVQDPAVVVTFPLVNDPNTCLLAWTTTPWTLPSNTGLCAHPDFEYVK
ILDEASGKHYVLLESLLRTLYKDPKKAKFKIVEKLKGKDMLGWKYEPLFDYLYDEFKDYG
FKVLNDTYVTADSGVGIVHQAPAYGEDDYRVALAHGVISDTRVPPNPVDDQGCFTAVVRD
FEGQHVKAADKGIIKHLKGTGRLIVDSQLLHSYPFCWRSDTPLIYRTVPSWFIKIQDIVP
QMLENIAGSHWVPSFVKEKRFANWISNSPDWAVSRNRFWGTPLPIWVSDDGKEVVCVGSV
EELKKLSGYEGELTDIHRDKIDHITIPSKEGRGVLKRTNEVFDCWFESGSMPYASAHYPF
ENVEQFEKSFPGDFIAEGLDQTRGWFYTLTVLGTHLFGKLPFKNCVVNGIVLAEDGKKMS
KRLKNYPDPNLIMDNYGSDALRLYLINSPVVRAETLRFKEAGVKEIVSKVLLPLWNSYQF
FEQQVSLLKKVADLDFMFDPAAEKTNSNVLDRWILASCQSLLKFVNEEMAAYRLYTVVPR
LLELIDNTTNWYIRFNRRRLKGEYGLEDTKHALNTLFEVLYTLCRGLAPFTPFITDNIYM
RLLPHIPKELHAEDNRSVHFLPFPEVREELFDEAVERQVKRMQSVIELGRICRDRANKGL
KIPLKTLVVIHPEQQYLDDIKSLETYILEELNVREIVLSSDEEKYNVQYSATADFSVLGK
KLKKDAVKVKKALPNLKSQEIKDYLKSGEIVVDGIKLEAEDLMVKRGLAQDSSNKDQEFN
TDNDVLIILDVASYPELEQEGLAREVIRRVQDLRKKAGLVPTDDVGMEYRVLSDPDGVGL
EKAFENQGPLFEKALRRNVDKHVITELDGKIPENSNEKVIAEEEQELHKATFLLRLVKL
NT seq
3240 nt
NT seq
+upstream
nt +downstream
nt
atgtctattgacttccctcgcgaggaggagcgcgtgcttgcgcgatggaaggagatcgac
gccttcctgaggcaagttgagctgtccaaaggcaaagaaccatataccttctacgatgga
ccgccgttcgcgaccggactgccgcattatggccatctcttggcgtccaccattaaggac
atcattccgcgttactggtccatgaagggtcgttacgttgagcggagatttggctgggat
acccacggtgttcccatcgagtacgaaatcgataaggaattgggcatgtccggacgtgat
gctgtgcgtgagattggaattgcaaagtacaacgaaaagtgtcgcgccattgtcatgaga
tatgcggccgaatggagaactaccattgaccgtcttgggcggtggatcgacttcgacaac
gactacaaaaccatggataccaacttcatggaatctgagtggtgggtgttcaagcgtctc
ttcgacaagggcgctgtataccgtgggtacaaggtcatgccctatagtacagcgttggcg
acgcctctcagtaactttgaggcttcccaaaattacaaagatgtccaagacccggcagtc
gttgtcaccttcccactcgtaaacgacccaaacacatgcttgttagcatggaccaccact
ccatggacactaccatccaacactggtctttgcgcacaccccgacttcgaatacgtcaag
atcctcgacgaagcatccggcaaacactacgtcctcctcgaatccctgctacgcacactc
tacaaggaccctaagaaggccaagttcaagattgttgagaagctcaagggcaaagacatg
ctaggctggaagtacgagcccctctttgactacctgtacgatgagttcaaggactacggc
ttcaaggtcttgaacgatacctatgttacagctgacagcggtgtgggtatcgttcaccag
gcgcccgcatacggagaggacgattaccgcgtcgcactcgcccacggagtcatatccgat
accagagtaccaccaaatccagtcgacgaccaaggctgcttcactgcagttgttcgcgac
tttgagggccagcacgtcaaggcagcagacaaaggcatcatcaagcacctgaaaggcact
ggacgcttgatcgtagactcacagcttctccatagctatcctttctgctggcggtctgat
actcccttgatttaccgaactgttccctcatggttcatcaagatccaggacattgtccca
cagatgctggagaacattgcaggctcacactgggttccttcgttcgtcaaggagaagcgc
ttcgccaactggatctctaattcgcctgactgggcagtttcaagaaaccgtttctggggt
actccactcccgatctgggtcagcgatgacggaaaagaggttgtgtgcgttggcagtgta
gaggagctgaagaaacttagcggatacgagggtgaactcaccgacattcaccgtgacaag
atcgaccatattaccattcccagtaaggagggcaggggtgtgctcaagagaactaatgaa
gtctttgactgttggttcgagtctggctctatgccctacgctagtgcgcactacccattc
gagaatgtggagcagttcgagaagtcttttcctggagattttatcgcagagggtctcgat
caaactcgcggttggttctatactctcacggtcttgggtacgcatctttttggcaagctg
cctttcaagaactgtgtcgtcaacggaatcgtacttgcagaagacggcaagaagatgtca
aaacgtctaaagaactaccccgatcccaaccttatcatggacaactatggctccgatgct
ctgcgattgtatctcatcaattcgccggtcgttcgcgccgagacacttcgcttcaaggag
gcaggtgtcaaggagattgtttccaaggtgttgctaccactatggaacagctaccagttc
ttcgagcagcaggtatcgctcctgaagaaggtcgctgatcttgacttcatgtttgatcca
gcggccgagaagaccaactcaaacgttctggatcggtggatcctggcatcatgccaatcg
ctgttgaagtttgtcaacgaagagatggccgcatacaggctgtacactgtcgtcccgcgg
ttactcgagctcattgataacacgaccaactggtacattcgcttcaaccgtcgccgtctg
aagggtgaatacggtctggaagacacaaagcacgcactcaacacactcttcgaagtcctc
tacacactctgccgtggactcgcgcctttcacaccattcatcacggacaatatctacatg
cgattgttgccgcacatccccaaggagttgcacgcagaggataaccgtagtgtacacttc
ctgccattcccagaggtccgtgaggagctgttcgatgaagccgttgagcgccaggtcaag
cgcatgcagtcggtcattgaacttggccgtatctgcagagatcgcgcgaacaagggcctc
aagatcccgctcaagacgctggtagtcatccacccagagcaacaatatcttgacgacatc
aagtcgctcgagacctacatcttggaggaactgaacgtgcgagaaatcgtgctgtcgagc
gacgaggagaagtacaacgtgcaatactctgcgacagccgacttctccgttctgggcaaa
aagctcaagaaggacgccgtcaaggtcaagaaggccctgccaaatctcaagagtcaagag
atcaaggattacctaaagagcggcgagattgtggttgatggcatcaagcttgaggccgaa
gacttgatggtcaagcgtggtctcgcccaggactcgagcaacaaagaccaagagtttaac
actgacaatgacgtccttattattctcgacgtggcttcgtaccctgagcttgagcaggaa
ggtcttgcacgagaggtcattcgccgtgtccaagatttgcgcaagaaggctgggctagtg
cctactgacgatgtgggtatggagtaccgagtattgagcgaccctgatggggtgggcctt
gagaaggcattcgagaaccaaggaccactgtttgagaaggctttgaggaggaatgttgac
aagcatgtcatcactgagcttgatggcaagatacccgaaaacagcaacgagaaggtgatt
gcagaggaggagcaagagcttcacaaggcaacattcttgctgcgactggttaagctgtaa
DBGET
integrated database retrieval system
