Bipolaris oryzae: COCMIDRAFT_103083
Help
Entry
COCMIDRAFT_103083 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
bor
Bipolaris oryzae
Pathway
bor03420
Nucleotide excision repair
bor04111
Cell cycle - yeast
bor04120
Ubiquitin mediated proteolysis
bor04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
COCMIDRAFT_103083
04120 Ubiquitin mediated proteolysis
COCMIDRAFT_103083
09124 Replication and repair
03420 Nucleotide excision repair
COCMIDRAFT_103083
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
COCMIDRAFT_103083
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
bor04121
]
COCMIDRAFT_103083
03400 DNA repair and recombination proteins [BR:
bor03400
]
COCMIDRAFT_103083
Enzymes [BR:
bor01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
COCMIDRAFT_103083
Ubiquitin system [BR:
bor04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
COCMIDRAFT_103083
Multi subunit type E3
SCF complex
Ring finger protein
COCMIDRAFT_103083
Cul2 complex
COCMIDRAFT_103083
Cul3 complex
COCMIDRAFT_103083
Cul4 complex
COCMIDRAFT_103083
Cul7 complex
COCMIDRAFT_103083
Cul8 complex
COCMIDRAFT_103083
Cul9 complex
COCMIDRAFT_103083
DNA repair and recombination proteins [BR:
bor03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
COCMIDRAFT_103083
TCR (transcription coupled repair) factors
Cul4-CSA complex
COCMIDRAFT_103083
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
PHD_NSD
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
19118217
NCBI-ProteinID:
XP_007690879
JGI:
Cocmi1_103083
UniProt:
W6YYE9
LinkDB
All DBs
Position
Unknown
AA seq
111 aa
AA seq
DB search
MADAPPAKTKTSKAGASGEGDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQ
ANQASATSEECTVAWGICNHAFHFHCISRWLKTRQVCPLDNRDWEFQKYGR
NT seq
336 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgcgcccccggccaagaccaagacatccaaggccggcgccagtggagagggc
gacaagaagcgcttcgaggtcaagaagtggaatgccgttgctctctgggcctgggacatc
gtcgtcgacaactgtgccatttgccgcaaccacatcatggacctgtgcattgaatgccag
gccaaccaagcttcggcaactagcgaagagtgcacggtagcctggggtatctgcaaccac
gccttccacttccactgcatctcacgatggctcaagacgcgacaggtctgcccgctagac
aacagggactgggagttccaaaagtacggccgatag
DBGET
integrated database retrieval system