KEGG   Bipolaris oryzae: COCMIDRAFT_103083
Entry
COCMIDRAFT_103083 CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K03868  E3 ubiquitin-protein ligase RBX1 [EC:2.3.2.32]
Organism
bor  Bipolaris oryzae
Pathway
bor03420  Nucleotide excision repair
bor04111  Cell cycle - yeast
bor04120  Ubiquitin mediated proteolysis
bor04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    COCMIDRAFT_103083
   04120 Ubiquitin mediated proteolysis
    COCMIDRAFT_103083
  09124 Replication and repair
   03420 Nucleotide excision repair
    COCMIDRAFT_103083
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    COCMIDRAFT_103083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:bor04121]
    COCMIDRAFT_103083
   03400 DNA repair and recombination proteins [BR:bor03400]
    COCMIDRAFT_103083
Enzymes [BR:bor01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.32  cullin-RING-type E3 NEDD8 transferase
     COCMIDRAFT_103083
Ubiquitin system [BR:bor04121]
 Ubiquitin ligases (E3)
  UBL E3 ligases
   COCMIDRAFT_103083
  Multi subunit type E3
   SCF complex
    Ring finger protein
     COCMIDRAFT_103083
   Cul2 complex
     COCMIDRAFT_103083
   Cul3 complex
     COCMIDRAFT_103083
   Cul4 complex
     COCMIDRAFT_103083
   Cul7 complex
     COCMIDRAFT_103083
   Cul8 complex
     COCMIDRAFT_103083
   Cul9 complex
     COCMIDRAFT_103083
DNA repair and recombination proteins [BR:bor03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      COCMIDRAFT_103083
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      COCMIDRAFT_103083
SSDB
Motif
Pfam: zf-rbx1 zf-ANAPC11 zf-RING_2 zf-C3HC4 zf-C3HC4_2 zf-RING_11 PHD_NSD zf-RING_16
Other DBs
NCBI-GeneID: 19118217
NCBI-ProteinID: XP_007690879
JGI: Cocmi1_103083
UniProt: W6YYE9
LinkDB
Position
Unknown
AA seq 111 aa
MADAPPAKTKTSKAGASGEGDKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQ
ANQASATSEECTVAWGICNHAFHFHCISRWLKTRQVCPLDNRDWEFQKYGR
NT seq 336 nt   +upstreamnt  +downstreamnt
atggcagatgcgcccccggccaagaccaagacatccaaggccggcgccagtggagagggc
gacaagaagcgcttcgaggtcaagaagtggaatgccgttgctctctgggcctgggacatc
gtcgtcgacaactgtgccatttgccgcaaccacatcatggacctgtgcattgaatgccag
gccaaccaagcttcggcaactagcgaagagtgcacggtagcctggggtatctgcaaccac
gccttccacttccactgcatctcacgatggctcaagacgcgacaggtctgcccgctagac
aacagggactgggagttccaaaagtacggccgatag

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