Bipolaris oryzae: COCMIDRAFT_107544
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Entry
COCMIDRAFT_107544 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K01697
cystathionine beta-synthase [EC:
4.2.1.22
]
Organism
bor
Bipolaris oryzae
Pathway
bor00260
Glycine, serine and threonine metabolism
bor00270
Cysteine and methionine metabolism
bor00670
One carbon pool by folate
bor01100
Metabolic pathways
bor01110
Biosynthesis of secondary metabolites
bor01230
Biosynthesis of amino acids
Module
bor_M00035
Methionine degradation
bor_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
COCMIDRAFT_107544
00270 Cysteine and methionine metabolism
COCMIDRAFT_107544
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
COCMIDRAFT_107544
Enzymes [BR:
bor01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.22 cystathionine beta-synthase
COCMIDRAFT_107544
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PALP
CBS
DUF7317
Motif
Other DBs
NCBI-GeneID:
19119069
NCBI-ProteinID:
XP_007692560
JGI:
Cocmi1_107544
UniProt:
W6YTJ6
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MSTKTRPAMPPVVMNSIMEQIGNTPLVRLNKIPQSLGIRATVYAKVEAFNAGGSVKDRIA
LRMIESAEKSGRIKPGDTLIEPTSGNTGIGLALVGAVKGYRTIITLPEKMSPEKVAVLKA
LGAEIIRTPTSAAWDSPESHIGVARRLVKEIPNAHILDQYSNVDNPLAHECGTAEEVWAQ
TEGKVTMLVAGAGTGGTITGLARGLRKHKQDIKIIAADPHGSILALPESLNEEHVNEGYK
VEGIGYDFIPDVLEQKIVDKWYKTDDRSSFQYARRLIAEEGILCGGSSGSAMAAMVEAAR
DMNLTEDDVVVVILPDSIRSYLSKFVDDDWLAANDLLPPTPPHSPDSNAHLRRLSTSKKS
DPFHGATIASLRLKPVTTVAANSPCSEAIETMREKGFDQLPVSVYSSSGKARLVGLVTLG
NLLSYIAAGRATPKSPVEDVMFDFRKLNEVVKDLGRLSLDGDNAKNTQKGGKKGRKEFVE
ITKETTLADLNKFFEWNSAAVVTEQVDGEHRAVAVVTKVDLLTWMVRQGGANGASN
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgtctaccaaaacgcgccccgccatgccacccgtcgtcatgaacagcatcatggaacaa
attggcaacacaccactcgtccgcctgaataaaatcccacagtcgcttggcatccgagct
accgtttacgcaaaagttgaggctttcaacgctggtggcagtgtcaaagaccgcattgcc
ctgcgcatgatcgagtccgcagaaaagtctggtcgcataaagcctggcgacacactcatt
gagcctacgtctggtaacactggtattgggcttgcgctagtcggagcagtcaagggatat
aggacaatcattactcttcctgagaagatgagcccggaaaaggtggcggtgctcaaagcg
cttggtgctgagattatccgcacgcccaccagcgcagcgtgggatagtcccgagagccac
attggtgttgcgcgaagactggtcaaagaaatccccaatgcgcatatcctagatcagtac
tcgaatgtcgacaacccgcttgcccacgagtgcggtactgctgaggaggtatgggcgcag
acggagggcaaggtcactatgcttgttgctggcgctggaaccggaggcacaattactggt
cttgcacggggtctgagaaaacacaagcaggacatcaaaattattgccgccgatcctcat
ggaagtattctggctctacccgaaagtctgaatgaagagcatgtgaatgaggggtacaag
gttgagggaattggatacgatttcattcctgatgtcttggagcagaagattgtagacaag
tggtacaagaccgacgaccgatcttctttccagtatgcgcgcaggttgattgctgaggag
ggcatcctctgcggtggttcttccggaagcgccatggcagctatggttgaggcggctcgg
gacatgaacctgactgaagacgatgtcgtggttgtcatactacccgatagcattcgcagc
tatctcagcaagtttgtcgatgatgactggctcgctgccaacgacctcctccctcccaca
cctccacactcacctgactccaacgcacatctccgccgcctctccactagcaagaagtcc
gaccccttccatggcgccactatcgcttctctgcgtctgaagcccgtcaccactgtcgcc
gcaaactcaccttgcagcgaagccattgaaaccatgcgcgaaaagggtttcgaccaacta
cccgtcagcgtatactcctcctctggcaaggcccgattagtcggtctagtcactctcggc
aacctcctctcatacattgccgccggccgcgccacaccaaagtcgcccgtcgaagatgtc
atgttcgatttccgcaaattgaacgaagtcgtcaaggacctcggccgcctctccctcgac
ggcgacaacgccaagaacacgcaaaagggcggcaagaagggccgaaaagaatttgttgaa
attacaaaggagactacccttgccgatcttaacaagttcttcgagtggaatagcgcagca
gttgttacggagcaggttgatggcgagcacagggctgttgctgttgtcaccaaggtggat
ttgctgacctggatggttaggcagggtggtgctaatggtgcgtcgaattag
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