Bipolaris oryzae: COCMIDRAFT_23431
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Entry
COCMIDRAFT_23431 CDS
T03125
Name
(RefSeq) hypothetical protein
KO
K12845
U4/U6 small nuclear ribonucleoprotein SNU13
Organism
bor
Bipolaris oryzae
Pathway
bor03008
Ribosome biogenesis in eukaryotes
bor03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bor00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
COCMIDRAFT_23431
09122 Translation
03008 Ribosome biogenesis in eukaryotes
COCMIDRAFT_23431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bor03041
]
COCMIDRAFT_23431
03009 Ribosome biogenesis [BR:
bor03009
]
COCMIDRAFT_23431
Spliceosome [BR:
bor03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
COCMIDRAFT_23431
Ribosome biogenesis [BR:
bor03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
COCMIDRAFT_23431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribosomal_L7Ae
PELOTA_1
RNase_P_pop3
Motif
Other DBs
NCBI-GeneID:
19120429
NCBI-ProteinID:
XP_007684608
JGI:
Cocmi1_23431
UniProt:
W6ZYT0
LinkDB
All DBs
Position
Unknown
AA seq
126 aa
AA seq
DB search
MAEDNSAAWPQADQALSQEILDLVQQATHYRQLKKGANEATKTLNRGISELIILAADTSP
LAILLHLPLLCEDKNVPYVYVPSKMALGRACGVARPVIAASITTNEASDLMGQIRTLKDK
VERLQI
NT seq
381 nt
NT seq
+upstream
nt +downstream
nt
atggccgaggacaacagcgccgcgtggccccaggctgaccaggccttgtcgcaagagatt
ctcgaccttgtccagcaggctacccactacaggcagctgaagaagggtgccaacgaagct
accaagaccctcaaccgtggtatcagtgagctgatcatccttgccgccgacacctcccct
ctcgccatccttctgcacctgcctctgctttgcgaggacaagaacgtgccatacgtctat
gttccttccaagatggctctcggccgtgcttgtggcgttgccaggcccgttatcgccgct
agcatcacgaccaacgaagcctctgacttgatgggccagatccgcaccctcaaggacaag
gtcgagcgcctccagatctaa
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