KEGG   Bipolaris oryzae: COCMIDRAFT_31597
Entry
COCMIDRAFT_31597  CDS       T03125                                 
Name
(RefSeq) hypothetical protein
  KO
K12608  CCR4-NOT complex subunit CAF16
Organism
bor  Bipolaris oryzae
Pathway
bor03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bor00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    COCMIDRAFT_31597
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bor03019]
    COCMIDRAFT_31597
Messenger RNA biogenesis [BR:bor03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     COCMIDRAFT_31597
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_29 FtsK_SpoIIIE AAA_15 AAA AAA_23 PduV-EutP AAA_25 DUF3584 AAA_28 ORC-CDC6-like SRP54 AAA_22 Zeta_toxin RsgA_GTPase Arf nSTAND3 AAA_13 AAA_14
Other DBs
NCBI-GeneID: 19121903
NCBI-ProteinID: XP_007682340
JGI: Cocmi1_31597
UniProt: W6ZGP7
LinkDB
Position
Unknown
AA seq 288 aa
MSGATISKEIAPSIDVKNLSYAFPDGSSGLKDVFLDLPPGSRTLLIGANGAGKTTLLRLL
SGKRMAPANTVHISGIDPFKMGLEGVTYLGLEWVLNPIVRTDIDVPTLLSSVGGDHYAER
RDELVRILDIDLSWRMHAVSDGERRRVQLAMGLLRPWTILLLDEITVDLDLLSRSNFLNF
LKKETETRPCTIVYATHILDNLATWPTHLVHMSLGKVKKWGSTEEMNVKVEAAGGQQYTG
NSQLGELVLKWLKEDLDERGPRNGKGEGLSYQNLEGKGGYGAEKRAED
NT seq 867 nt   +upstreamnt  +downstreamnt
atgtctggagcgacaatctcaaaagaaatcgcgccgtcgattgacgtgaaaaatctcagc
tatgcctttcccgatggctcaagtgggctcaaggatgtgtttctcgacctgccgccgggc
agcagaacattgctgatcggagccaacggtgcgggtaaaactacattgttgcgtctcctc
tcaggcaagcgcatggcccccgccaacaccgtccacatctccggtatcgaccctttcaag
atgggcttggaaggcgtgacatatctcggtctcgaatgggtgctgaaccccattgtccgc
accgacattgatgttcctacgctgctttcctcggtcggcggcgaccactacgccgagcgc
cgtgacgagctcgtgcgcatcctcgacatcgacttgagctggcgcatgcatgccgtctcg
gacggagagaggcgacgagtgcagctcgccatgggtctcttgaggccgtggaccatcctg
ctgctcgacgagattacggtagatttggatctgctgtctcgcagcaactttctcaacttc
ttgaagaaagagacggagaccaggccttgtacgattgtttatgcgacgcatatcctggat
aacctcgctacgtggccgacgcatttggtacatatgagtctgggcaaggtaaagaagtgg
gggagcacagaggagatgaatgtcaaggttgaggcggctgggggccagcaatacacgggg
aatagtcagttgggcgagcttgtgctcaagtggctcaaggaagatttggatgagaggggt
ccgaggaatggaaagggagagggtctgagttatcagaacttagaaggcaagggcgggtat
ggtgcggagaagagggcggaggattaa

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