Bosea sp. RAC05: BSY19_3523
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Entry
BSY19_3523 CDS
T04462
Symbol
ligA
Name
(GenBank) DNA ligase, NAD-dependent
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bos
Bosea sp. RAC05
Pathway
bos03030
DNA replication
bos03410
Base excision repair
bos03420
Nucleotide excision repair
bos03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY19_3523 (ligA)
03410 Base excision repair
BSY19_3523 (ligA)
03420 Nucleotide excision repair
BSY19_3523 (ligA)
03430 Mismatch repair
BSY19_3523 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bos03032
]
BSY19_3523 (ligA)
03400 DNA repair and recombination proteins [BR:
bos03400
]
BSY19_3523 (ligA)
Enzymes [BR:
bos01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BSY19_3523 (ligA)
DNA replication proteins [BR:
bos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSY19_3523 (ligA)
DNA repair and recombination proteins [BR:
bos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BSY19_3523 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSY19_3523 (ligA)
MMR (mismatch excision repair)
DNA ligase
BSY19_3523 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BSY19_3523 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
BRCT
DNA_ligase_ZBD
PTCB-BRCT
Nlig-Ia
HHH_5
RecQ5
Zn_ribbon_PaaD
Motif
Other DBs
NCBI-ProteinID:
AOG07664
UniProt:
A0A1B3NQP9
LinkDB
All DBs
Position
complement(3695667..3697823)
Genome browser
AA seq
718 aa
AA seq
DB search
MSEPEDIPVEQLTSRQARAEHKRLAEAVEAADIAYHQNDAPEMDDAAYDALRRRLVAIEA
AFPALKAASSASTTVGAKASGKFAKIRHRVPMLSLDNAFTDEAVAEFVQRVHRFLGRKDE
DPIAFTAEPKIDGLSLSLRYEKGALVHAATRGDGEEGEDVTVNARTIAEIPQTLAGPGVP
DIAEVRGEVYLGHADFAGINERQREKGLPEFANPRNAAAGSLRQLDATITASRPLRFFAY
AWGEMPELPAPTQSGVVEAFGRWGFRTNPLMARCETVEALIAHYRLIESQRATLGYDIDG
VVYKVDELALQARLGFVSRAPRWAIAHKFPAELATTVLEAIEIQVGRTGALSPVARLRPV
TVGGVVVTNATLHNEDYIRGYDSKGERIRDGEPPDIRVGDTVTVKRAGDVIPRVAAVDLS
KRPADAAPYAFPTLCPACGSHATREINPRSGKEDAVRRCTGGLICPAQAVERLKHFVARD
ALDIDGLGDKQIEFFHGDPDLPVKEPADIFTLAARDAANLKKLKDKEGFGAQSVAKLFAA
IEERRTPPLNRFIFGLGIRHIGETNARLLARHYGSFEALRAAGLAAADPASPERQELDAI
DGVGPTVVEALTDFFGEPHNEELLDRLLAQVTPQPLEAVASASPVAGKIVVFTGALERMT
RDEAKAMAERLGAKVAGSVSSKTDLLVAGPGAGSKLKDAQKHGVEVIDEAGWFDLVGG
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagcccgaagacatccccgtcgagcaactgacctcccgccaggcccgggccgag
cataaacggctggccgaggcggtggaggcggccgacatcgcctatcaccagaacgacgcg
ccggagatggacgacgcggcctatgacgcgctgcggcgccggctggtggcgatcgaggcg
gcgtttccggcgctgaaggcggcctcgtcggccagcaccacagtcggcgccaaggcgtcg
ggcaaattcgccaagatccgccaccgcgtgccgatgctctcgctcgacaacgccttcacc
gacgaggcggtggccgagtttgtccagcgggtgcaccgcttcctcggccgcaaggacgag
gaccccatcgccttcaccgccgagcccaagatcgacgggctgtcgctctcgctgcgctat
gagaagggcgcgctcgtccatgccgcgacgcgcggcgatggcgaggagggcgaggacgtc
acggtcaacgcccgtaccatcgccgagatcccgcagacgctcgccggtcccggtgtgccg
gatatcgccgaggtgcgcggcgaggtctatctgggccatgccgatttcgcggggatcaac
gagcgccagcgcgagaaggggcttcccgaattcgccaatccgcgcaatgcggcggcgggc
tcgctgcgccagctcgacgccacgatcaccgcctcgcggccgctgcgcttcttcgcttat
gcctggggcgagatgccggagctgccggcgcccacccaatcgggcgtcgtcgaggcgttc
ggccgctggggcttccgcaccaatccgctgatggcgcgctgcgagaccgtcgaggcgctg
atcgcgcattaccggctgatcgagagccagcgcgccacgctcggctacgacatcgacggc
gtcgtctacaaggtcgacgaactcgcgcttcaggcgcggctcggcttcgtctcgcgggcg
ccgcgctgggcgatcgcgcataaattcccggcggaactcgcgaccacggtgctggaggcg
atcgagattcaggtcgggcgcaccggtgcgctctcgcccgtggcgcgcctgcgcccggtg
acggtcggcggcgtcgtcgtcaccaatgcgacgctgcacaatgaggattacatccgcggc
tacgattccaagggcgagcgcatccgcgatggcgagccgcccgacatccgcgtcggcgac
actgtcacggtcaagcgcgccggcgacgtcatcccgcgggtggcggcggtcgatctgtcg
aagcggccggcggatgcagctccttacgcctttccgacgctctgccccgcctgcggcagc
catgcgacgcgggagatcaatccgcgatctggcaaggaggatgcggtgcgccgctgcacc
ggcgggctgatctgcccggcccaggcggtcgagcggctgaagcatttcgtcgcgcgcgat
gcactcgacatcgacgggctcggcgacaagcagatcgagttcttccatggcgatcccgac
ctgccggtgaaggagccggccgacatcttcacgctcgccgcgcgcgacgccgccaatctc
aagaagctgaaggacaaggaaggtttcggcgcgcagagcgtcgccaagctcttcgccgcg
atcgaggagcgccggacgcccccgctcaaccgcttcatcttcgggctcggcatccgccat
atcggcgaaaccaatgcccgcctgctggcgcgccattacggctccttcgaggccctgcgg
gcggcggggctggcggcggccgacccggcctcgcccgagcggcaggaactcgacgcgatc
gatggcgtcgggccgaccgtggtcgaggcgctgaccgacttcttcggcgagccgcacaac
gaggaactgctcgaccggctgctcgcgcaggtgacgccgcagccgctggaggcggtggcg
tcggccagccccgtcgccggcaagatcgtggtcttcaccggcgcgctcgagcgcatgacc
cgcgacgaggccaaggcgatggcggaacgcctcggggccaaggtggcgggctcggtgtcc
tccaagaccgacctgctggtggcgggacccggcgcgggctcgaagctgaaggatgcgcag
aagcacggcgtcgaggtgatcgacgaggccggctggttcgatctcgtcgggggctga
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