Boseongicola sp. MH-Pat-all_autometa_1-3: GKR98_01120
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Entry
GKR98_01120 CDS
T10172
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bosg Boseongicola sp. MH-Pat-all_autometa_1-3
Pathway
bosg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bosg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKR98_01120 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bosg03400
]
GKR98_01120 (nth)
Enzymes [BR:
bosg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
GKR98_01120 (nth)
DNA repair and recombination proteins [BR:
bosg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GKR98_01120 (nth)
Prokaryotic type
GKR98_01120 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
HHH_8
IMS_HHH
AAA-ATPase_like
Motif
Other DBs
NCBI-ProteinID:
QMU56928
UniProt:
A0A7D7VD36
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All DBs
Position
205125..205769
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AA seq
214 aa
AA seq
DB search
MAKQLSYNTIHEVFTRFQNSEAEPKGELHHVNAYTLVVAVALSAQATDAGVNKATHKLFE
IADTPEKMLALGEEGVTEHIKTIGLFRQKAKNVIKMSRILVDEYDGQVPSSRAALRSLPG
VGRKTANVVLNMWFKHPAQAVDTHIFRVGNRTGLAPGKDVVAVERAIEDQVPAEFQQHAH
HWLILHGRYTCVARKPKCNACLIRDLCQFEDKTE
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacagctttcttataatacgatccacgaggtctttacccgttttcagaactct
gaggccgagccaaagggcgaactgcaccacgtcaatgcctatacgctggttgtggccgta
gcgttgtcggcacaggccacggatgcaggtgtgaacaaagccacccacaagctgttcgag
atcgccgacacgccggagaagatgttggcgctgggcgaagagggtgtgaccgagcatata
aagaccattggtctgtttcgtcaaaaggccaagaacgtcatcaagatgagccgaattctg
gtggatgaatatgacggtcaggtcccgtcgtcgcgtgccgccttgcggtcattgccgggt
gtcgggcgcaaaactgcgaatgtggttttgaacatgtggttcaagcatcccgctcaagcg
gtagatacccatatattcagggttggaaatcgcaccggtctggcaccgggcaaggatgtg
gtggcggttgaacgggcgatcgaagatcaggttccagccgaatttcagcagcatgcgcat
cactggctcatcctgcatgggcgatacacttgcgtcgcccgcaaacccaaatgcaacgcg
tgtctgatacgcgatctgtgccaattcgaggacaagacagaatga
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