Bradyrhizobium ottawaense: CIT37_06835
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Entry
CIT37_06835 CDS
T05524
Symbol
mdeB
Name
(GenBank) alpha-ketoglutarate dehydrogenase
KO
K00163
pyruvate dehydrogenase E1 component [EC:
1.2.4.1
]
Organism
bot
Bradyrhizobium ottawaense
Pathway
bot00010
Glycolysis / Gluconeogenesis
bot00020
Citrate cycle (TCA cycle)
bot00620
Pyruvate metabolism
bot00785
Lipoic acid metabolism
bot01100
Metabolic pathways
bot01110
Biosynthesis of secondary metabolites
bot01120
Microbial metabolism in diverse environments
bot01200
Carbon metabolism
bot01210
2-Oxocarboxylic acid metabolism
Module
bot_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
bot00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
CIT37_06835 (mdeB)
00020 Citrate cycle (TCA cycle)
CIT37_06835 (mdeB)
00620 Pyruvate metabolism
CIT37_06835 (mdeB)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
CIT37_06835 (mdeB)
Enzymes [BR:
bot01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.1 pyruvate dehydrogenase (acetyl-transferring)
CIT37_06835 (mdeB)
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Gene cluster
GFIT
Motif
Pfam:
PDH_E1_M
Transketolase_C_1
Transketolase_N
Transketolase_C
Motif
Other DBs
NCBI-ProteinID:
AWL91949
UniProt:
A0A2U8P2K1
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Position
complement(7893811..7896489)
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AA seq
892 aa
AA seq
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MTAHIDPPRKVVNADQDAVETADWLASLGSLHHSAGAERVRYILAALDRRAKELGVLPDS
PPFSPYRNSIPLEQQKPYPGDIAIETRLTAIIRWNALAMVVRANKAYGELGGHVASYASA
AEIFEVGFNHFFRASSSESEGDLVYFQPHSSPGVYARAYLEGRLSDENLKLYRQELSGPG
LSSYPHPWLMPEFWQVPSASMGLGPISAIYQARFMKYLQHRGLVQTAGRHVWGVFGDGEM
DEPESIAGLALAARENLDNLTFVVNCNLQRLDGPVRGNGQVIQELESLFQGAGWNVIKVL
WGSDWDDIFARDSKHALLRKFADTVDGKYQTLGAKDGAYNLAHFFSEDPEVRALVAHMSD
VDIDGLKRGGHDFKKLFAAFAAAKDIKGRPTVILAKTKKGYGMGGAGESRMTSHQAKKLD
VDALYAFRDRFALPLSNEQVEDLEFFRPAEDSAEIQYLRARRAALGGYMPARRRASAALP
VPPLQSYAEFALRGDGKETSTTMAIVRLFTNLLKDKTLGPRIVPIVADEARTFGMANLFR
QVGIYSPAGQLYEPEDAGSMLYYKEAIDGQLLEEGITEAGAISSWTAAATSYSIHNFPLL
PFYIYYSMFGFQRVGDLIWAAADQRARGFLIGATAGRTTLGGEGLQHQDGSSHLMAATVP
NCRAYDPAFSYEVAVIVDHGMRSMLEQGNDEFYYLTAMNENYAQPSMPDDARDGIIKGLY
RVLPSADGPAKIRLVGSGAILPEALAAAAMLQSEWKVACEVWSATSFSELAREARDVERT
NRLSPLSTPVESHVVQCLGGKVPIVAASDYVRAYPQLIGSYIEAPYTVLGTDGFGRSDTR
AALRSFFEVDRKQIVVAALSALAKLGQVAREQVAEAIASYELPTGVASPWSR
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacacatcgatccgccacgcaaggtcgtcaacgccgatcaggatgcggtcgaa
accgccgattggctcgcctcgcttggatcgctccaccacagcgccggtgccgagcgcgtg
cgttacatcctggctgcgctcgatcggcgcgcgaaggagctcggcgttctgccggactct
ccgccgttttcgccctatcgcaattctattccgctcgagcagcagaagccctaccccggc
gacatcgcgatcgagacccgcctgacggcgatcattcgctggaacgcgctcgcgatggtg
gtccgtgccaacaaggcctatggggagctcggcgggcacgtcgccagctacgcctcggcc
gcggagattttcgaagtcggtttcaatcatttctttcgcgcgtcaagctccgagtcggag
ggcgacttggtgtatttccagccgcattcgtcccccggagtctatgcacgagcgtatctc
gaaggccgactgtcggacgaaaatctgaagctgtatcgccaggaactgagcggccccggt
ctgtcgtcctatccgcatccctggctgatgccggagttctggcaggtgccgtcggcgtcg
atgggccttgggccaatcagcgcgatctaccaggcgcggttcatgaagtatctgcagcat
cgcggcctggtgcagacggctggtcgtcacgtctggggtgtgttcggcgacggcgagatg
gacgagccggaatcgatcgccgggctcgccctggcggcgcgggaaaatctcgacaacctc
accttcgtcgtcaattgcaacctgcagcgcctggatgggccggtccgcggcaacgggcag
gtgattcaggaactcgaatcacttttccagggcgccggctggaacgtaatcaaggtgctg
tggggatcggactgggacgatatcttcgcgcgcgatagcaagcatgcgctgctgcgcaaa
ttcgccgacaccgtcgatggcaaatatcagacgctcggcgccaaggatggggcctacaac
ctcgcccacttcttcagcgaggatcccgaggtccgggcgctagttgcgcacatgtcggac
gtggatatcgacggccttaagcgcggtggccacgacttcaagaagctgttcgcggccttt
gccgccgcgaaagacattaagggtcggccgaccgtcattctggcgaagaccaagaagggc
tacggcatgggcggcgccggcgagtcgcgcatgacgtcgcaccaggccaagaagctcgat
gtcgacgcgctgtatgcgttccgcgaccggttcgccctgccgctcagcaacgagcaagtc
gaggatctggaattcttcaggcctgcggaagacagcgcggaaattcagtacctgcgcgcc
cgtcgcgcggcactcggtggctacatgccggcgcggcgacgcgcttcggcggcgctgccg
gtgccgccgctgcaatcctacgcggagttcgcgctgcgcggcgacggcaaggagacgtcg
accacgatggcgatcgtgcggctgttcaccaatttgctcaaggacaaaacgctcggcccg
cgcatcgtcccgatcgtcgccgacgaagcccgcaccttcggaatggcgaacctgttcaga
caggtcggcatctactcgccggcgggacagctctacgagccggaagatgccggttcgatg
ctgtactacaaggaagcgatcgacggtcaattgctggaggaggggatcaccgaggcgggg
gcgatttcgtcatggaccgcggcggcgacctcctatagcatccataacttcccgttgctg
ccgttctatatctactattcgatgttcggctttcagcgggtcggcgatctgatctgggcg
gcggcggaccagcgcgcgcgtggctttttgatcggggcgacggccggccggacgacgctc
ggcggcgaaggcttgcagcatcaggacgggtccagccatctgatggcggcgaccgttccg
aactgccgggcctacgatccggcattctcctacgaggtggccgtcatcgtcgatcacggc
atgcggtcgatgctcgagcagggcaacgacgagttctattacctcacggcgatgaacgag
aactatgcgcagccctcgatgcccgacgatgcacgcgacggcatcatcaagggtctctat
cgggttctgccgagcgctgacgggccggcgaagatcaggctggtcggctcgggcgccatt
ctcccggaggcgctcgccgccgcagcgatgctgcaaagcgaatggaaagtggcctgtgaa
gtctggtcggcaacgagcttttccgagctggcgcgggaggcgcgcgatgtggagcgaact
aatcggctctcgccactgtcgaccccggtcgagagccacgtcgtacaatgcctcggcggc
aaggtgccgatcgtcgcggcatcggattatgtccgggcgtatccgcaactgatcggttct
tacatcgaggcgccctatacggtgctgggcaccgacggcttcgggcgcagcgatacacgc
gccgcgctgagatcgttcttcgaggtcgatcgcaagcagatcgtcgttgcggcgctctcg
gcgctggcaaaattgggtcaagtggcgcgtgagcaggtcgccgaagccatcgccagctac
gaattgccgaccggcgttgcatcgccttggtcgcgctga
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