Bordetella parapertussis 12822: BPP3334
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Entry
BPP3334 CDS
T00140
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bpa
Bordetella parapertussis 12822
Pathway
bpa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BPP3334 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpa03400
]
BPP3334 (nth)
Enzymes [BR:
bpa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BPP3334 (nth)
DNA repair and recombination proteins [BR:
bpa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BPP3334 (nth)
Prokaryotic type
BPP3334 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Gmx_para_CXXCG
HHH_8
DprA_N
Motif
Other DBs
NCBI-ProteinID:
CAE38619
UniProt:
Q7W5F8
LinkDB
All DBs
Position
3591970..3592605
Genome browser
AA seq
211 aa
AA seq
DB search
MNAVKRREIFARLQAANPKPTTELEYETPFQLLIAVLLSAQATDKSVNLATRKFFPRHGT
PQAMLELGEEGLAEYIKTIGLYRTKAKNAIATCRLLLERHGGEVPQSREALEALPGVGRK
TANVVLNTAFGEATIAVDTHIFRVSNRTGIAPGKNVLEVERKLEKVVPREYLLDAHHWLI
LHGRYVCVARKPKCPQCGISDLCEYKLKTKA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtcaaacgccgcgaaatcttcgcccgcctgcaagccgccaatcccaaaccc
accaccgagctcgaatacgagacgccgttccagttgctgatcgcggtgctgctgtcggcc
caggcgaccgacaagtcggtcaacctggccacgcgcaaattcttcccgcgccatggcacg
ccgcaggccatgctggaactgggcgaggaagggctggccgagtacatcaagaccatcggc
ctgtaccgcaccaaggccaagaacgccatcgccacctgtcgtctcctgctcgagcgccac
ggcggcgaagtgccgcaaagccgcgaagcgctggaggccctgcccggcgtgggccgcaag
accgccaacgtggtgctcaacaccgccttcggcgaggccaccatcgcggtcgacacgcac
atcttccgcgtctccaaccgcaccggcatcgcccccggcaagaacgtgctggaggtcgag
cgcaagctggagaaggtggtgccgcgcgagtacctgctggatgcccaccattggctcatc
ctgcatggccgctacgtgtgcgtggcgcgcaagcccaaatgcccgcagtgcggcatctcg
gacctgtgcgaatacaagctgaaaaccaaggcctga
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