Bacillus pacificus: LMD38_18615
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Entry
LMD38_18615 CDS
T07947
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bpac
Bacillus pacificus
Pathway
bpac03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LMD38_18615 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpac03400
]
LMD38_18615 (nth)
Enzymes [BR:
bpac01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
LMD38_18615 (nth)
DNA repair and recombination proteins [BR:
bpac03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LMD38_18615 (nth)
Prokaryotic type
LMD38_18615 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-ProteinID:
UEP93351
LinkDB
All DBs
Position
complement(3594390..3595037)
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AA seq
215 aa
AA seq
DB search
MLNKTQIRYCLDTMADMYPEAHCELIHDNPFELVIAVALSAQCTDALVNKVTKNLFQKYK
TPEDYLSVSLEELQQDIRSIGLYRNKAKNIQKLCRMLLDDYNGKVPEDRDELTNLPGVGR
KTANVVVSVAFGIPAIAVDTHVERVSKRLAICRWKDSVLEVEKTLMKKIPMDEWSVTHHR
MIFFGRYHCKAQRPQCEECPLLEVCREGKKRMKGK
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgttaaataaaacgcaaattcgctattgtttagacacaatggcggatatgtatccagaa
gcacattgtgaattaattcatgataatccgtttgaactagtaatcgcggtagcgttatct
gcacaatgtacagatgcacttgtaaataaagtgacgaaaaatttatttcaaaaatataaa
acgccagaagattatttaagtgtttcgctagaagaattacaacaagatatacgttctatt
ggtttgtatagaaataaagcaaaaaacattcaaaaattgtgccggatgttactggatgat
tataacggaaaagttccagaagaccgtgacgagttgacgaacttgccaggagtagggaga
aaaacagcaaatgtagttgtttcggtagcgtttggtattccggcaattgctgttgatacg
catgtagaaagagtgagtaaacggttagcgatttgtagatggaaagattcggtgttagaa
gtagaaaagacattaatgaagaaaattccgatggatgaatggagcgtcacacatcaccgt
atgattttctttggacgttatcactgtaaagcgcagcgaccacaatgtgaggagtgccct
ttactagaagtatgtcgtgaaggaaagaagcgaatgaaggggaaataa
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