Bordetella parapertussis Bpp5: BN117_3298
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Entry
BN117_3298 CDS
T02297
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bpar
Bordetella parapertussis Bpp5
Pathway
bpar03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BN117_3298 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpar03400
]
BN117_3298 (nth)
Enzymes [BR:
bpar01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BN117_3298 (nth)
DNA repair and recombination proteins [BR:
bpar03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BN117_3298 (nth)
Prokaryotic type
BN117_3298 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
RecR_HhH
Gmx_para_CXXCG
HHH_8
DprA_N
Motif
Other DBs
NCBI-ProteinID:
CCJ50631
UniProt:
K0ML98
LinkDB
All DBs
Position
3554366..3555001
Genome browser
AA seq
211 aa
AA seq
DB search
MNAVKRREIFARLQAANPKPTTELEYETPFQLLIAVLLSAQATDKSVNLATRKFFPRHGT
PQAMLELGEEGLAEYIKTIGLYRTKAKNAIATCRLLLERHGGEVPQSREALEALPGVGRK
TANVVLNTAFGEATIAVDTHIFRVSNRTGIAPGKNVLEVERKLEKVVPREYLLDAHHWLI
LHGRYVCVARKPKCPQCGISDLCEYKLKTKA
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccgtcaaacgccgcgaaatcttcgcccgcctgcaagccgccaatcccaaaccc
accaccgagctcgaatacgagacgccgttccagttgctgatcgcggtgctgctgtcggcc
caggcgaccgacaagtcggtcaacctggccacgcgcaaattcttcccgcgccatggcacg
ccgcaggccatgctggaactgggcgaggaagggctggccgagtacatcaagaccatcggc
ctgtaccgcaccaaggccaagaacgccatcgccacctgtcgtctcctgctcgagcgccac
ggcggcgaagtgccgcaaagccgcgaagcgctggaggccctgcccggcgtgggccgcaag
accgccaacgtggtgctcaacaccgccttcggcgaggccaccatcgcggtcgacacgcac
atcttccgcgtctccaaccgcaccggcatcgcccccggcaagaacgtgctggaggtcgag
cgcaagctggagaaagtggtgccgcgcgagtacctgctggatgcccatcattggctcatc
ctgcatggccgctacgtgtgcgtggcgcgcaagcccaaatgcccgcagtgcggcatctcg
gacctgtgcgaatacaagctgaaaaccaaggcctga
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