Bombus pascuorum (common carder bee): 132905526
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Entry
132905526 CDS
T09597
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm3
KO
K12622
U6 snRNA-associated Sm-like protein LSm3
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03018
RNA degradation
bpas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132905526
09123 Folding, sorting and degradation
03018 RNA degradation
132905526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bpas03019
]
132905526
03041 Spliceosome [BR:
bpas03041
]
132905526
Messenger RNA biogenesis [BR:
bpas03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
132905526
mRNA degradation factors
5'-3' decay
Lsm complex
132905526
Spliceosome [BR:
bpas03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
132905526
Complex C
U2 snRNP components
132905526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
DUF150_C
vATP-synt_E
TIG_SUH
Motif
Other DBs
NCBI-GeneID:
132905526
NCBI-ProteinID:
XP_060812900
EnsemblRapid:
ENSBPAG00000010313
LinkDB
All DBs
Position
3:18440196..18441043
Genome browser
AA seq
103 aa
AA seq
DB search
MADETEQVPAINVKEPLDLIRLSLDERIYVKMRNERELRGRLHAYDQHLNMVLGEAEETV
TTVEIDEETYEEVYRTTKRNISMLFVRGDGVILVSPPSMRAPI
NT seq
312 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgagacagagcaggtaccagctataaatgttaaagaacccctagatcttata
agattgagcctggatgagagaatatatgttaaaatgagaaatgagagagaattacgagga
cgattacatgcttatgatcaacatttaaatatggtgttgggtgaagcagaagagactgta
actacagtagaaattgatgaagagacttatgaagaagtttatcgtacaactaaaagaaat
atctctatgctttttgttcgtggagatggagtaattttggtttcaccaccaagcatgaga
gcacctatataa
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