Bombus pascuorum (common carder bee): 132911491
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Entry
132911491 CDS
T09597
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bpas
Bombus pascuorum (common carder bee)
Pathway
bpas03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpas00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132911491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpas03041
]
132911491
Spliceosome [BR:
bpas03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
132911491
Complex C
U5 SnRNP specific factors
132911491
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
132911491
NCBI-ProteinID:
XP_060824133
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All DBs
Position
10:11238910..11243439
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AA seq
980 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASDSEDENEYGNAGDDAEDRERSDEEMEEDRDEVREQSEQGNS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKPKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVRQTHPYLHSVTDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTPGHVNFSDEATAAIRLSDGAVLIVDAAE
GVMLNTERLLKHALQEKLALTVCINKIDRLILELKLPPLDAYYKLRHIIEEINGLIALYS
DSENPSFVSPAIGNVCFASSEYNVCFTLKSFAALYAKIHPSLNANEFSKRLWGDIYFNSK
TRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMNI
RPLLRLVCTRFLGDMCGLVDMCVAHVPSPQSHAPVKVQHVYTGSMDSSLAQDMINCDPDG
RLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLWI
SEARYSIELNRVPAGNWVLIEGIDRPIVKTSTITDLSNSDDLHIFRPLKFNTQSVIKIAV
EPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEID
IKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVKITWNKK
RLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLNSARDAIIQGFQW
GTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYL
FVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQ
GQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKF
FDDPMLLELARQDVLLNYPL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatctatacgatgaatttggcaattatattggtcccgatttggcttctgat
agcgaagatgaaaatgaatatggaaatgctggagacgacgcagaagacagagaacgctcc
gacgaggaaatggaagaagacagagatgaagttagagaacaatcggaacaaggaaattcc
atggcagttgtattgcacgaagataaaagatattatccaagtgctttagaagtttatggg
ccagaggtagagacattggtacaagaagaagatgcgcagccattggataaaccgctgata
gcaccaacacgaaaaccaaagtttcaaataaaacaacagcaactaccagagacaacatat
agcatagaatttttagcagatatgatggatgcacctcaccttatacgtaatgttgttcta
cttggtcacttacatcacggcaaaactactttggtcgattgtctagtgagacagacccat
ccctatcttcacagcgtaacagacgaaaaacctttaaggtataccgacacgttattcacc
gagcaacagcgaggagtatcgacgaaagcaacacccgtgacgttgttactgcaagacgta
aaatcaaagtcctaccttttaaatatattcgatactccgggtcacgtaaatttttctgac
gaggcgacagcggcgatacgtttatccgatggagcggtgctgatcgtcgatgccgccgaa
ggcgtcatgttgaatacagaacgtttactaaaacacgcgcttcaggaaaaacttgcgtta
acagtttgtataaataagatagaccgactgatcctcgaactaaaattgccccccttagac
gcgtactataaattaagacacatcatcgaagaaattaatggactgatagcgctatattcg
gattctgaaaatccatctttcgtgtcacctgcaatcggaaacgtgtgctttgcgagctca
gagtacaatgtctgtttcaccctgaaatcctttgcggcgctttacgctaagatccatccc
tcgcttaacgccaatgaattttcgaaacgactatggggagatatatactttaactcgaaa
acacggaaatttacgaaaaaaccgccacacaataccgcacagcgcagctttatcgaattc
attctcgagccattgtacaagatcttcgcgcaagttgtcggcgatgttgacacaacttta
cccgatgtactggacgagttaggcataagactaacatcagaagaaatgaaaatgaatatt
agacctctgttgagattggtatgcacgcgtttcttgggagacatgtgcggattagtcgat
atgtgtgtagcccacgtccctagtcctcagtcacacgcaccagtcaaagttcaacacgtg
tacacaggctctatggattcgtctctcgcgcaggatatgatcaattgcgatcctgacggc
aggctaatgattcacagcacaaaaatgtatcctaccgaggactgcactctattcgtggtc
ctcggaagggtgatgtcaggtacactcgaggcaggacaacgtgtccgcgtattaggtgaa
gcgtactcgcgtaccgacgaagaagattctcgcgttttaaccgtgggaaggttgtggatc
agcgaggcacgctactcgatcgagctgaacagagttcccgcgggcaactgggtacttatc
gaaggtatagacaggccgatcgtaaaaacgagcaccattaccgatctcagtaattcggac
gacttacatatcttccgaccattgaagttcaatactcagagcgtgatcaaaatcgcggtc
gaacctgtcaatccatcagagttaccaaaaatgttagacggtctgagaaaagtgaataaa
agttatccattgctgggcacgcgagtcgaggagagcggcgaacacgtggtcctaggtacc
ggtgaattgtacttggactgcgcgatgcacgacctgcgtcgtatgtattcggaaatcgat
ataaaagtagcagacccggtcgttgctttcgcggagacggtagtagaaacgagttctctc
aagtgtttcgccgagacacccaataaacggaacaagttgacgatgatcgccgaaccactc
gagagaggcctggccgaagacatcgaggcggaacacgttaaaatcacgtggaacaaaaaa
cgtctaggagaatttttccagacgaagtacgactgggatttattggcggcgcgaagcata
tgggcgtttggtccagacgccacgggtcctaatattctggtcgacgatactttgccatca
gaagtagacaagacgctattgaacagcgcccgtgacgccatcattcagggtttccagtgg
ggtacgcgagaaggtcctctctgcgaagaaccgattcgaaacgtgaagttcaaaatcctg
gacgccgtgattgctcaagaacctcttcatcgaggaggtggtcagataattccgacggcc
agaagggtagcctattctgccttccttatggcaacgcccagattgatggaaccctacttg
ttcgtcgaagttcaagcgcctgcggattgcgtgtcagcagtttataccgtgctggctaaa
agaaggggtcacgtgactcaagacgctcccgttcccggaagtcccttgtataccatcaaa
gcattcattccggcaatcgatagtttcggattcgagactgacttgcgaacacatacgcaa
ggccaggcgttctgcctgtccgtgttccatcattggcagatcgtgcctggcgatccgtta
gataaaagcattaccattcgaccactggagccacagccagctacgcacttagctagagag
tttatgttgaagacaaggaggcgaaagggactttcggaagacgtatctataaacaaattc
ttcgacgatcctatgttattggaattagcccgacaggacgttctattgaattacccgtta
taa
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