Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110160314
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Entry
110160314 CDS
T05002
Name
(RefSeq) G/T mismatch-specific thymine DNA glycosylase-like isoform X1
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110160314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpec03400
]
110160314
Enzymes [BR:
bpec01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
110160314
DNA repair and recombination proteins [BR:
bpec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110160314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
110160314
NCBI-ProteinID:
XP_020780603
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MEDRSPAAMPVSPDYIQQWIHQTQQFHALQAQYSGYHQHYTYPPTEGTIAGAQSPMEQMQ
PPPLPPQNQHNPPPQDQQGPAELGKPPPKKRGRPAQPKEPKEPKPPKAPKPPKAPKAPKA
PKDPNAPKAKPGPKPKKAKPTEEAGQEGNPEEESPKKVKRKVDRFKGMSEEEVMKKTLPD
LLDYNLDYVIIGINPGLMAAYIGRWFPGPGNHFWKCLFLSGFTEEQLNHMHDTVLPQKYK
MGFTNMVARATPGSKDLSSKELREGGKILVEKLKKFKPLIAVFNGKCIYEMFCRELFGKK
PKTLEFGLQPHKIPECDVALYLMPSSSARCAQFPRAQDKVHFYIKLRELRDKLKGELKSR
DVEEVQYSFNLQLAKEDAKRMAIKEEQYDPGYEDAYGGAYTERGGEGGGEEGKSNGHCTF
SNNNTEPSSASSSQPPAAVLSPDGQWMNQTFTDQIPHISAPPGGTV
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaggtctccagccgcgatgcctgtgtctccggactacatccagcagtggatc
catcaaacacagcagttccacgctctgcaggctcaatactccggataccaccagcactac
acctaccccccaacagagggcactattgccggtgctcagagccccatggagcagatgcag
cctcctcctcttcctccacagaaccaacataacccaccacctcaggaccagcagggacca
gcagagcttggcaaacctccaccgaagaagcgcggccgcccggctcagcccaaagagccc
aaagagcccaaacctccaaaagctcccaaacccccaaaggctccgaaggctccgaaggct
cctaaagatccaaatgctcccaaagccaaaccaggacccaaacccaaaaaggccaagccc
acagaggaggccggacaagaggggaatcctgaggaagagagccccaagaaggtgaaaagg
aaagtggaccgctttaaaggcatgtccgaagaggaggtgatgaagaagactctgcccgac
ctgctcgattacaacctggactatgttattatcggcataaacccagggctcatggctgct
tacatcgggcgctggtttcctggacctggaaatcacttctggaagtgtctgttcctgtcg
ggcttcacagaggagcagctgaaccacatgcacgacacagttctgcctcagaaatacaag
atgggcttcacaaatatggtggccagagctacaccaggcagcaaagacctcagcagtaaa
gagttgcgggaaggaggcaaaatcctggtggagaaactgaagaagtttaagcctctgatc
gctgtcttcaacgggaaatgtatctacgagatgttttgtcgggaactttttgggaaaaaa
cccaaaactctggagtttggacttcagccacacaaaatccctgagtgtgatgtggcgcta
tacctgatgccatcctccagtgcgcgctgtgcccagttccccagggcacaggataaggtc
catttctacataaaactgcgtgagctcagggacaaactgaagggggagctgaagagcagg
gatgtggaggaagtgcagtactcgttcaacctgcagctcgccaaagaggacgctaagcga
atggctattaaagaggagcagtatgatcctggatacgaggatgcatatggaggagcctac
actgagaggggaggagagggaggaggagaggaggggaagagcaacggacactgtaccttt
agcaacaataatacagagccatcgtctgcctcatcgtctcaaccgcctgcagctgtgctg
tctccagatggacagtggatgaaccagaccttcactgaccagatcccccatatcagtgca
ccaccagggggtactgtgtga
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