Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110161451
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Entry
110161451 CDS
T05002
Symbol
eftud2
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110161451 (eftud2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpec03041
]
110161451 (eftud2)
Spliceosome [BR:
bpec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
110161451 (eftud2)
Complex C
U5 SnRNP specific factors
110161451 (eftud2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Roc
MMR_HSR1
Ras
Motif
Other DBs
NCBI-GeneID:
110161451
NCBI-ProteinID:
XP_020781854
LinkDB
All DBs
Position
Unknown
AA seq
971 aa
AA seq
DB search
MEADLYDEFGNYIGPELDSDDDDDDLDAEDRDMDEGDDDEDDEPADADDDVPGMEVVLHE
DKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKHRKFTLMEQELPATVYDMEFLAD
LMDSPELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRDDLDLRYTDILFTEQERGVGI
KSTPVTMVLPDSRGKSYLFNIMDTPGHVNFSDEVTSSIRLSDGIVLFIDAAEGVMLNTER
LIKHAVQERMAITICINKVDRLILELKLPPTDAYYKLRHIVDEVNGMLSTYSTDENVVVS
PLLGNVCFASSQYSICFTLGSFAKIYSDTYGDINYTEFAQRLWGDIYFNPKTRKFTKKAP
TSNSQRSFVEFVLEPLYKILSQVVGDVDTSLPRVLDELGIHLSKEELKLNIRPLLRLVCN
RFFGEFTGLVDMCVQHIPSPQDGAKTKIEHTYTGGLDSDLGETMSECDPDGPLMCHTTKM
YSTEDGVQFHAFGRVLSGTIQAGQPVKVLGENYTLEDEEDSQVCTVGRLWISVARYQIEV
NRVPAGNWVLIEGCDQSIVKTSTITEPRGNEDAQIFRPLKFNTASVIKIAVEPVNPSELP
KMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVVT
FCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQTK
YDWDLLAARSIWAFGPDTTGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLCD
EPIRNVKFKILDAVIAQEPLHRGGGQVIPTARRVVYSAFLMATPRLMEPYYFVEVQAPAD
CVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFALSVF
HHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLEL
AKQDVVLNYPM
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atggaggcagatctctatgatgagtttgggaactacatcggtccggagctggactcagat
gatgacgatgatgatctggatgcagaggacagagacatggatgagggggatgatgatgaa
gacgatgagcctgcagatgccgatgatgatgttccagggatggaggtggttttacacgag
gacaagaagtactaccccacagcagaggaggtctatgggcccgaggtggaaactattgta
caagaagaggacacacaacctctcacagagcccatcattaaacctgtaaaacacaggaag
ttcacactgatggagcaagaattaccggccacagtttatgatatggaatttcttgctgat
ctcatggacagtccagagctaattcgtaatgttaccttgtgtggtcaccttcatcatggc
aagacttgctttgtggattgcctcattgaacaaacacatccagaaatcagaaaaagagat
gatttagatctccggtacacagacatactctttactgaacaagagagaggagttggtatc
aaaagtaccccagtcacaatggtgttgccagactccagagggaaatcctacctcttcaac
atcatggacacccctggacatgtcaacttctccgatgaggtcacatccagtatccggctt
tccgatggaattgtcctgttcattgatgctgcagaaggagtgatgttgaacacagagcgc
ctgatcaaacacgcagtgcaggagcgaatggccatcacgatctgcataaacaaagtggac
cgtctcatcctggagttaaaactgccccccacagacgcttactacaaactcaggcacatc
gtggatgaagtcaatggaatgcttagcacatattccactgatgagaatgtggtggtgtct
cctcttctgggaaacgtgtgctttgccagctctcagtacagtatctgcttcaccttgggc
tccttcgcaaagatttactctgacacttacggcgacattaactatacagaatttgctcag
agactttggggagacatttatttcaacccaaaaacccgcaagttcacaaagaaagctcct
accagtaactctcagcgcagctttgtggagtttgttctggagcctttgtacaagattctc
tcacaggtggttggagatgtggacacttctctccctcgagttttggatgaactgggaatc
catttgtccaaagaggagctcaagttgaacatcagacctttgctcaggctggtctgtaac
cgcttctttggagagttcaccggcctggtggacatgtgtgtgcagcacatcccctcacca
caagatggcgccaagaccaaaatagagcacacctacactgggggcctggactcagacctt
ggggagaccatgtcagagtgtgaccctgatggccccttgatgtgccacacaacaaagatg
tacagcacagaggatggggtccagtttcacgcttttggtcgtgtcttgagtgggacgatt
caggcgggacagccggtcaaagtgttgggagagaactatactctggaggacgaagaggac
tcccaggtctgcaccgtggggagactctggatctctgttgccagataccaaattgaagtg
aaccgtgtacctgctggaaactgggtcctcattgaaggctgtgaccagtccatcgtgaaa
acctccaccatcacagagcccagaggcaatgaagatgcacaaatcttcagacccctaaag
ttcaacacagcgtcagttataaagatcgctgtggagcctgtgaatccgtcagaactgcca
aaaatgttggacgggctcaggaaagtcaacaagagctacccctccctcaccactaaagtg
gaggagtctggagagcatgtgatcttgggaacaggagaactctatctggactgtgtgatg
cacgacctcagaaagatgtactcagagattgacataaaagtggctgatccagtcgtaaca
ttctgtgagacagttgttgaaacctcctctctgaagtgttttgctgaaacgccaaacaaa
aagaataagattacgatgatcgcggagcctctggaaaagggtctggcagaagacatcgag
aacgaagtggtgcagatcacatggaacaggaagaagttgggtgagttcttccagaccaag
tacgactgggatcttctggctgccaggtccatctgggcttttggaccagacacaactggg
cccaacatcctggtggacgacacactgccctctgaggtggacaaggcactcctgggctca
gttaaagacagcatcgtgcagggtttccagtggggcactagggagggtcctctgtgtgat
gagcccatcagaaatgtcaagtttaagatcctggatgcagtcatcgcacaagagccgcta
caccgaggcgggggccaggtcatccccacagcccgaagggtggtctactccgccttcctc
atggccacaccaaggctgatggagccatattactttgtggaggtgcaggctccagcagat
tgtgtgtctgctgtgtacaccgtgttggctcgaaggagaggacacgtgacccaggacgcc
cccatcccaggctcccctctctacaccatcaaagccttcatccccgccatagactcgttc
gggtttgagacagatctccgcacgcacacccagggccaggccttcgctctctccgtgttt
caccactggcagatagttcccggtgatccgctggataagagcatcgtgatccggcctctg
gagcctcagcctgcgccacatttggcccgagagttcatgatcaagacgagaaggcgcaag
ggtctgagcgaggatgtgagtatcagcaagttcttcgacgatcctatgttgttggagctg
gccaagcaggacgtggtgctcaactatccaatgtga
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