Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162336
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Entry
110162336 CDS
T05002
Name
(RefSeq) protocadherin gamma-C5-like isoform X1
KO
K16497
protocadherin gamma subfamily C
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
bpec04515
]
110162336
Cell adhesion molecules [BR:
bpec04515
]
Cadherins
Protocadherins
110162336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_tail
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Sde0182_C
Motif
Other DBs
NCBI-GeneID:
110162336
NCBI-ProteinID:
XP_020782873
LinkDB
All DBs
Position
Unknown
AA seq
967 aa
AA seq
DB search
MDSQRRKRRGGQGPLFSLCFYLASLCSASSQLSYSVSEELSPGSIVGNIAKDLGLTTQRI
VQRNLRVVSDSPTQYFELKQATGDLVIKQQIDREQLCELSPVCSLPIQILLENPLEMLRV
VVEILDVNDNAPHFTTTNISLDISEAASPGTRFRLESAHDPDVGTNSLRTYHLAANDLFI
LNVETKSDGSKFPELVVDKPLDRETQASFRLLLTAVDGGQPEKSGSTLLLIKILDVNDNA
PIFDEPVKKVTLLENVAPGTLVTKLNATDSDSGNNGEVSFLFSKYTPSRVLEHFTVDAKT
GEIRVKSDVDYEKTTSYHITIQARDGGSPAMEGSCNVIVDIIDVNDNAPEVTLTSPVSPV
REDAAPDTVIALLSARDLDSGPNGKVTLTVQQGLPFKLSATFGTHYRLTTARALDRETVP
EYTVVIKATDAGSPPLTSQTTFVVKLTDVNDNAPTFSQSSYSVDIPENNAPTAPITTVTA
TDPDLGDNAKVSYSILPSMVQGSPISSYVYINPESGHIFSMRSLDHEQLNAFRIEVQAQD
AGVPPRTTNVTVHVFVIDVNDNAPVLVHPSYQKEKGLQLSVPPSAGPGHLINKLVAVDAD
SGHNAWLFYSIAPGPHVGMFRVAAHSGELRIAHKWAEEEAGLSYHITVIIQDNGDPPKST
SVNITVTVDEKSPVNDAPVAPRHKPFYHHSGMPNITLYLIISLACVSGVSFITFVVLMVR
CLRHRSPGLGGSDCCCFEQRSSRYHQRPSKDLHLQLNTDGPIRYMEVVGGPQEPHTRTYR
PCYSTLSSRSDFVFMKTPMLSHNNTLNMTLSRQHLMNSVSEQKPPQNDWRFTQGQRPGPS
GATGGPEVAMGTGPWPQPPTEAEQLQALMAAANAVNEATATLGPGTMGLSTRYSPQFTLQ
HVPDYRQNVYIPGSTATLTSNPQQQQATAQQATQQALPPPQVSAQPEPPKAAQTPASKKK
STKKEKK
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atggactcacagcggaggaagcgccgcggaggacaggggccgctattcagcctctgcttc
tatctggcgtctctctgctccgcgtcctctcagctcagctattccgtgtcggaggaacta
agcccgggctcgattgttgggaatatcgcgaaagatttgggacttacgacacagcggatt
gttcagagaaatttacgtgttgtttcggactctcctacccagtattttgagttaaaacaa
gcaactggcgacttggtgataaaacaacaaattgacagggaacaactttgcgagttaagt
ccagtttgttcactgcctattcagatacttctggaaaatcctttagaaatgctgcgtgtg
gtggtggaaatcctggacgtgaacgacaacgcaccgcactttacgaccacaaatatttct
ttggacatatcagaggcggcttcaccaggtacaaggtttcgattggagagcgcacacgat
ccagacgtgggtacaaattcgttacgcacgtatcaccttgccgccaatgacttatttatt
ttaaatgtagaaactaaaagtgacggcagcaaattcccggagttggtggtggacaaacct
ctggacagagagacgcaggcctcgttccgcttgttgctcacagctgtggatgggggtcag
ccggaaaaatccggctccacgctattactcattaaaatcttggatgtaaatgacaatgcg
cccatttttgacgagccagtaaagaaagtgacactgttggagaatgtggcaccaggcact
ttggtaacaaaattaaatgccacagactcagactcgggcaataatggagaggtatcgttt
ctgttcagcaaatacacaccttcacgtgtgcttgaacattttactgtagatgcaaaaacg
ggggaaatccgtgtgaagagcgacgtggattatgagaaaaccacctcttatcacattaca
attcaggcaagagatggaggctcacctgcaatggagggctcgtgtaacgtcatagtggat
atcattgatgtcaatgataacgcgcctgaagtgacacttacatcccctgtcagtccagtc
agagaagacgcagccccagacaccgtcatagctcttctaagtgctcgagatctagactct
gggcccaatggaaaggtgactttgactgtacagcaaggtttgcctttcaaactttctgca
acctttggtactcactacaggttgaccacggctagagccctggaccgagagactgtacct
gagtatacagtagttattaaggctactgatgcaggatccccaccactgacatcacaaact
acctttgtggtcaagttaactgatgtcaatgacaacgcacctactttctcccagagctca
tactctgtggacattcctgaaaacaatgcccctactgcccccattacaactgtaacagcc
actgacccagacctaggggacaatgccaaagtctcctactctatcctcccctccatggtc
cagggctcacccatctcctcatatgtctacattaacccagaaagtggccatatctttagc
atgcgttctttagatcatgaacaactcaatgctttccgtattgaagttcaagcacaggat
gctggggtgcccccaaggacaaccaatgtcacagtgcatgtatttgtgattgatgtcaat
gacaatgctcccgtgctggtgcacccctcctatcaaaaagagaaaggcctgcagctctct
gtgcccccttctgccggtccagggcacctcataaacaaactcgtagctgtcgatgctgac
agtggccataatgcatggttgttctactccattgcccctggaccacatgtgggcatgttt
cgtgttgcagcacacagtggtgaacttcgcattgcccataaatgggcagaagaggaggca
ggactgtcttatcacataacagtcatcatccaggacaatggtgatccacccaagtctaca
tctgtcaacatcactgtaactgttgatgagaagagcccagtcaatgatgctcctgtggcc
ccccgccacaaacccttctaccaccactctgggatgccaaacatcaccctgtacctcatc
atatctctggcctgtgtgtctggagtctccttcatcacgtttgtggtgctgatggtgcgc
tgcctccgacaccggagccctggattgggtggttctgactgctgctgctttgagcagaga
tccagtcgctatcatcagagacccagcaaagaccttcacttacagcttaatacagacgga
cctatacggtatatggaagtggtgggtggcccccaggagcctcacacacgcacttacaga
ccctgctactccaccttatccagcagaagtgactttgtattcatgaagacgcccatgctg
agtcacaacaacacactcaacatgacactcagcaggcagcaccttatgaactctgtaagt
gagcaaaaacctcctcaaaatgactggcgcttcacacagggacaaagaccaggacctagt
ggggccactggaggacctgaggttgccatgggaaccgggccctggccccagcccccgact
gaagcggaacagctccaggctctgatggcagcagccaatgcagtgaatgaggccaccgcc
actttgggccccggcaccatgggactcagcacccgctacagcccccagttcaccctgcag
cacgtgcctgattaccggcagaacgtgtacatcccaggcagcaccgccacactcacctcc
aacccacagcagcagcaggccactgcccaacaagccacccagcaagctctgcccccaccc
caggtctcagcccagcctgagccccccaaggctgcccagacccctgcctccaagaagaag
tccactaaaaaggagaagaagtag
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