Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110162549
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Entry
110162549 CDS
T05002
Symbol
traf6
Name
(RefSeq) TNF receptor-associated factor 6
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec04010
MAPK signaling pathway
bpec04120
Ubiquitin mediated proteolysis
bpec04140
Autophagy - animal
bpec04144
Endocytosis
bpec04620
Toll-like receptor signaling pathway
bpec04621
NOD-like receptor signaling pathway
bpec04622
RIG-I-like receptor signaling pathway
bpec05132
Salmonella infection
bpec05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110162549 (traf6)
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110162549 (traf6)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110162549 (traf6)
04140 Autophagy - animal
110162549 (traf6)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
110162549 (traf6)
04621 NOD-like receptor signaling pathway
110162549 (traf6)
04622 RIG-I-like receptor signaling pathway
110162549 (traf6)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110162549 (traf6)
09171 Infectious disease: bacterial
05132 Salmonella infection
110162549 (traf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110162549 (traf6)
04121 Ubiquitin system [BR:
bpec04121
]
110162549 (traf6)
Enzymes [BR:
bpec01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110162549 (traf6)
Membrane trafficking [BR:
bpec04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
110162549 (traf6)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
110162549 (traf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4
zf-C3HC4_2
zf-RING_UBOX
zf-RING_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_5
TRAF3_RING
U-box
RING_XB3-XBAT31
TRAF6_Z2
zf-RING_11
zf-rbx1
zf-TRAF_2
SlyX
Prok-RING_4
BLI1
NAD_binding_5
DUF7310
DM
Motif
Other DBs
NCBI-GeneID:
110162549
NCBI-ProteinID:
XP_020783103
LinkDB
All DBs
Position
Unknown
AA seq
536 aa
AA seq
DB search
MACYDSCKTLEEDSYEGAVGGELSECALQMMEKDRESLLSPSEGPGTLTSSSSLSTPTPQ
QGYDVEFDPPLESKYECPICLMALRNAVQTPCGHRFCKNCIEKSIRDTGQKCPVDNEMLS
EDQLFPDNFAKREILSLSVRCPNPGCSGKMELRTLENHLSVCEFSTLPCPHCQKAVRKSL
VEQHAGEECPRRPVCCPDCVVYYIYEERQVHEQQCPFASVTCQYCDMDLLRDQMESHCDT
DCPKAPIACTFSIFGCKERMLRHDLAQHMQEFTQMHMRFMAEFLRGLSVNGAKPRAACNG
APPQPSEEMQRLREMDTRLVKQDHQLRELIILKETQTGQLTELRRRVSMLEETVKELEAQ
QCHGVFIWRLRNFSALLKNQEAGQPVVEHSPGFYTGRPGYKLCLRLHLQTPSALRCSNYI
SLFVHTMQGLFDSQLSWPFQGVIRLAILDQGPEGHHHMEMMETKPDLQAFQKPTIQRNPK
GFGYVTFMHLQQLNQKAFIKDDTLLIRCEVTPRFDTGHREGPAVQARGLEAPAARD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgctacgactcgtgtaagaccctggaggaggacagttatgagggtgcagtgggg
ggagagctgtctgagtgtgctctgcagatgatggaaaaggaccgtgagtcactcctgagc
ccatcggaggggcccggaaccctcacaagcagcagcagtctctcgaccccgacccctcag
cagggctacgatgtggagtttgacccccctctggagagcaagtacgagtgtcccatctgc
ctcatggccctccgcaacgctgtccagacaccttgcggacaccgattctgcaagaactgc
atcgagaaatccatacgggacacggggcagaagtgcccggtggacaatgagatgctgtct
gaggaccagctgtttccagataactttgccaaacgagagattctgtctctcagtgtgcgc
tgccccaaccctggctgctcaggcaagatggagctccgcactctagagaaccacctgtct
gtgtgcgaattctccaccctcccctgccctcactgtcagaaggcagtgaggaagagcctg
gtggagcagcacgccggagaggagtgtccccgcagacctgtgtgctgcccagactgtgtg
gtctattacatctatgaggagagacaggtccacgagcagcagtgtccctttgccagtgtt
acgtgtcagtactgcgacatggacctcctaagagaccagatggaatcccactgtgacact
gactgtccaaaggcacccatagcatgtacctttagtatttttggctgcaaggaaaggatg
ctgagacatgacctggcccagcacatgcaggagttcactcagatgcacatgaggttcatg
gctgagttcctgcgaggccttagtgtgaacggtgccaagcctcgagccgcctgtaacggc
gcccctccccagcccagcgaggaaatgcagaggctgcgggaaatggacacacggctggtg
aagcaggaccaccagctgagagagctcattatactcaaggagacacagacgggccagctg
acagagctgcgtcgtagggtgtccatgctggaggagacggtgaaagagctggaggcacag
caatgccatggagtgttcatctggaggctgcgcaacttctctgctctgcttaagaaccag
gaggcaggccagcctgtggtggagcacagcccaggcttctacaccggacggcctggttac
aagctgtgtctgcggctgcacctgcagacaccaagcgccctgcgctgctccaactacatc
tccctctttgtccacaccatgcaaggtttatttgacagccagctgtcctggcccttccag
ggtgtcatccgcctggccatcctggaccaggggcctgagggccatcaccacatggaaatg
atggagaccaaaccagacctgcaggcctttcagaagcccaccatccagcgcaaccccaaa
ggctttggctatgtcacgttcatgcacctgcaacagctgaaccagaaggccttcatcaaa
gacgacacactgctcatccgctgtgaggtcaccccgcgctttgacactggacacagggaa
gggcccgcagtgcaggcccggggcctcgaggctcctgctgcccgggactaa
DBGET
integrated database retrieval system
