Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110163356
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Entry
110163356 CDS
T05002
Symbol
kdm2a
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110163356 (kdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bpec03000
]
110163356 (kdm2a)
04121 Ubiquitin system [BR:
bpec04121
]
110163356 (kdm2a)
03036 Chromosome and associated proteins [BR:
bpec03036
]
110163356 (kdm2a)
Enzymes [BR:
bpec01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
110163356 (kdm2a)
Transcription factors [BR:
bpec03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
110163356 (kdm2a)
Ubiquitin system [BR:
bpec04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
110163356 (kdm2a)
Chromosome and associated proteins [BR:
bpec03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
110163356 (kdm2a)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
110163356 (kdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
F-box-like
JHD
F-box
JmjC
zf-CXXC
Cupin_8
IMUP
PHD
C1_1
LRR_Zer-1
Cupin_1
LRR_4
Motif
Other DBs
NCBI-GeneID:
110163356
NCBI-ProteinID:
XP_020783958
LinkDB
All DBs
Position
Unknown
AA seq
1272 aa
AA seq
DB search
MEDPNTRYSKRLRTGTRRRYQDDGISDDEIEGKRTFDLDEKLLSDRFTSDLIKYMDGKDF
TFEYIQKEGLKDPIVFKKSDGLGIQMPDPDFSVSDVKVFVGSRRIVDVMDVNTQKGIEMS
MAQWGRYYETPPSEREKLYNVISLEFSHTKLENLVKRPASVDLIDWVDNMWPRHLKERQT
DSTNAIIDMHYPKVQKYCLMSVQGCFTDFHIDFGGTSVWYHILRGRKVFWLIPPSPQNLE
MYENWVLSGKQGDIFLGDKCHDCQRIELQQGYTFMIPSGWIHAVYTPEDTLVFGGNFLHS
FNIPMQLNIYSIEDRTRVPAKFRYPFYYEMCWYVLERYLYCLTNTSHLTPEFQKYSLGIG
LSPDDVNGNDATNEVPNSSDMVDVKVKEEVGETDVAVPETKPKYVLTPLELEGLWNLLGK
LEELPAHKKCVPAGIEDAAALLQNMRDVLLQHADDDPTLSYTGEPIVKWPERPSWYEPPL
PPPPPSVLYRPRLGPSGHKTRRSTKRSISALRRRRVRCKRCAXXXXXXXXSCQFCHDMRK
FGGPGRMKKSCVMRQCLAPALPNTARCAICEEGEPEESNPSTHTLMECSVCNSIVHPRCI
KEPGEGKISKDLPSCWECPKCYQGKGSASESSSDEESGESEGSNSLPGDITGGGEAGKRS
RRGKPVSRPTAPPPSQRLLLQHQQSRKRASALELQLRKRIKLERSKIMAQKRVALERSGS
RLLSRLRSPNSRLSLGRGRGVTWASGSSFPATAAATGELEKPPSLNGTVSFKGRGRGVRL
RGGAVGRGFHSRDHGPVDDSEDSSSSSSSNSSSTEEEDEDEEAEGTQNGSPGGDKENQPQ
MRTERLTTKDLEDEKDNQICAYDYEEQMEQDTQTEIKDGFNKVTLQVPSRAKQDPSAIVP
KLEAIASTTTALIRNQYKALPRPPIRHPDLQTSRHTPPLTRSGRMCTHKTHQERVEASKR
IKECKLVKLGRGGSASSSADHPRIPLSALQEGGSEADRESSGAGPACEREVWVSVFRYLS
RADLCVCMAVCKNWYKWCLDKRLWTKIDLSIKPSVTPQALIGIIKRQPVTLDLSWTNISK
KQLNWLIGRLPGLKDLMLAGCSWASISALCSPGCPLLRSLDLRYADGVKDAQIRELITPP
GCDNRSPLRTIQSLRLSGLDISDSTVRLVIRHMPQLTKLDLSNCNSLSDHSINLLTAVGS
STRNTLTELNLAGCSKLSDTCLKYLRRLACITMLDLRGCKGVSRKACEAFISELSVNTLY
CLSDEKLIERIS
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccccaatactagatacagcaaacgtctgcgtacaggtacgcggcgacgttac
caagatgatggaatctccgatgatgaaattgaaggaaagcgaacatttgacttggatgag
aaattactgagtgatcgtttcacctctgacctgattaaatacatggatggaaaagatttt
acttttgaatatattcagaaggaaggtcttaaggaccccattgtgtttaagaagtctgat
ggccttggcatacagatgccggaccctgattttagtgtgagtgatgtgaaggtgtttgtt
ggtagcagacgcattgttgatgtaatggatgtaaacactcagaaaggaattgaaatgtca
atggctcaatggggccgttactatgagacaccaccatcagaaagggagaaactttacaat
gtcattagtctggagttcagccacacaaagttggagaatcttgtcaagcgcccggcttcg
gtggatcttattgactgggtagacaacatgtggccacgacatctcaaagaacggcagaca
gactctactaatgctattattgatatgcattaccctaaagtacaaaaatattgtctaatg
agtgtgcagggctgcttcacagattttcatattgactttggtggcacttcagtttggtac
catattcttcgaggcagaaaggtcttttggttaattccaccttcaccgcagaatctggaa
atgtatgagaattgggttttatctggaaagcaaggagatatatttcttggggacaagtgt
catgactgtcaacgaatagagctgcagcaaggctatacatttatgatcccatcagggtgg
atccatgcagtgtacactccagaggatactttggtatttggaggtaatttccttcatagc
ttcaacatccccatgcaactcaacatctacagcattgaagaccgcacaagggtaccagca
aagtttcgttatccgttctactatgagatgtgttggtacgtcctggagaggtatctttac
tgcctgacaaacacctcacatctcactcctgaattccaaaaatactcccttggaattggc
ctttctccagatgatgttaatggaaatgatgccacaaatgaagttccaaatagttctgat
atggtagacgtcaaggtgaaggaggaagtgggtgaaactgatgtggcagtaccagaaacc
aaacctaagtatgtgctgacacccctggagctggagggactgtggaacctcttggggaag
ctcgaggaattgccggcccataagaagtgtgtccctgcaggaatcgaggatgcagcagca
ttgcttcaaaatatgagggatgttttactgcagcatgcagatgatgaccctacactgtct
tacactggcgagcccattgtcaagtggccagaaaggccatcatggtacgagcctcccctc
cctccccctcctccatctgtattataccgacctcgattgggtccttctggccacaagaca
agacgttctaccaagcgatccatttctgccctgcgacgcagacgggtgaggtgtaaacgt
tgtgcnnnnnnnnnnnnnnnnnnnnnnngctcttgtcaattttgtcatgacatgaggaaa
tttggcggccctggtcgcatgaagaaaagctgcgtcatgaggcagtgcttggctcctgct
ttgcctaatacagcaagatgtgccatatgtgaagaaggtgaaccagaagaatctaatcca
agcactcacacactcatggagtgctcagtttgcaatagcattgttcatccacggtgcatt
aaggaaccaggtgaaggaaaaatcagtaaagatttgccaagttgttgggagtgtccaaag
tgttaccaaggcaaaggctctgcatcagagtcatccagtgatgaagaaagtggtgagtcc
gaaggttccaactctctgcctggagacattactggtggaggtgaagctggcaaaaggtca
agacgtgggaaacctgtgtcccgtccaacagcgcctcctccctctcagagactacttctt
cagcatcagcagagtcgaaaaagagccagtgcactggagcttcaactcagaaagaggatc
aagttggaacgaagcaaaataatggcgcaaaaacgagtcgcccttgagcgttcaggctct
agattgctgtccaggctgcgatctccaaacagcagactgtccctgggcaggggtcgggga
gtgacctgggcgagtggttcatcgttccctgccacagcagcagcgaccggggaattggag
aagccaccatctttgaacgggactgtaagttttaaaggcagaggccgcggagtgagattg
agaggtggagctgtaggaagagggtttcactccagagaccatggacctgtggatgacagt
gaagacagcagcagcagcagtagctccaacagcagcagcactgaggaggaggatgaagat
gaggaagcagagggaacacaaaatggctctccaggaggagataaagagaaccagccacaa
atgaggacagagaggctgacaaccaaagatctggaagatgaaaaagacaaccaaatctgt
gcatacgattatgaggagcagatggagcaagatacccaaactgaaattaaagatggcttt
aacaaagtgactctacaagttccaagcagggctaagcaagacccatcagccattgttcct
aagttggaagctattgcttcaactactactgcattaatacgcaaccagtataaagcactt
cctcggccacccatccgacatcctgatctccagaccagcaggcacacaccaccactcaca
cgcagtggtcgtatgtgtactcacaaaactcaccaagagagggtggaggcctctaaaaga
attaaagagtgtaaacttgttaaacttggccgtgggggctcagcttcttcatccgctgat
caccctcgcatccccctgtcggctctgcaggaaggtggcagtgaggcagacagagagagt
agtggtgctgggccggcctgtgaaagggaggtgtgggtgtctgtcttccgctacttaagt
cgagcagatctatgtgtctgcatggctgtctgcaaaaactggtataaatggtgcttagac
aaaaggctctggacaaaaattgacctcagcatcaagcccagtgtcactcctcaggccctc
ataggtataataaaaaggcagcctgtaacactggatctgtcatggaccaacatttccaaa
aagcagcttaactggcttattggacgcttacctggtctaaaggatctaatgttagcaggt
tgttcttgggcatctatttctgctctttgttcacctggttgccctctcctccgttcatta
gacctgcgctatgcagatggggtcaaagatgctcaaatcagggagctgataactccacca
ggttgtgataaccgcagtccccttcgcaccattcagagtttaagattgtcaggtctggac
atcagtgactcgacggtgcgtcttgtaatccgccacatgcctcagttaacaaaactagac
ctttccaactgcaacagtctctcagaccactccatcaacctgctcactgctgtgggctcc
tccacgcgaaacaccctcacagagctcaacctagcaggctgcagtaaactgtccgacaca
tgcctcaagtatctccgccgtcttgcctgcatcacaatgctcgacttgcggggctgtaaa
ggtgtctcccgcaaagcctgtgaagcattcatctctgagctgtctgtcaacacactctac
tgtctgtcagatgaaaaactgatcgagcggatatcctaa
DBGET
integrated database retrieval system
