Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110171504
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Entry
110171504 CDS
T05002
Symbol
ldlr
Name
(RefSeq) low-density lipoprotein receptor
KO
K12473
low-density lipoprotein receptor
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03272
Virion - Hepatitis viruses
bpec04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
110171504 (ldlr)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110171504 (ldlr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110171504 (ldlr)
Membrane trafficking [BR:
bpec04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110171504 (ldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
Psg1
hEGF
EGF_3
EGF
Motif
Other DBs
NCBI-GeneID:
110171504
NCBI-ProteinID:
XP_020792879
LinkDB
All DBs
Position
Unknown
AA seq
904 aa
AA seq
DB search
MGRLLYAYVVFLIFTIYQTSAFITCGTRQFQCGNGKCITARWVCDGTDDCGDGTDELPGT
CLAKSCRPTEFTCADRLNQCIPKSWQCDGKADCENGADEESCAPKQCTDSEFRCGTGQCV
SSSFVCDEESDCEDGSDEASCPPITCSSASFRCNSSACIPRLWACDGDLDCSDGSDEWPS
NCGSRTTVAAKSCSALEFKCGSGECIHSNWKCDGGVDCMDRSDEANCARTTCRPDEFECG
DGTCIHGSHQCNHQYDCQDMSDELGCVNVTQCEGPQKFRCRSGECIQMDKVCDRKRDCRD
WSDEPLRECGKNECLFSNGGCSHICNDLKIGYECLCPSGFYLVDRKRCEDIDECANPDTC
SQICINQIGSYKCQCEEGYQVDPATKACKAIGTIAYLFFTNRHEVRKMTLDKSEYTRVIP
RLKNAVALDMNMATKDIYWSDISQKKIYRAQMDLAENPSSHNILISTDIEAPEGIAFDWI
HRNLYWTDSIRSTISVVTADGTRRKTLFYQGLSKPRAIVVDPHSNFLYWTDWGNPAKIEK
GGLNGVDRTALVTDNIEWPNGITLDLLNQRLYWVDSKLHTLSSIDVQGGGRRTLIIDEEQ
LAHPLGLTVFEERVFWTDVSNNAILSANRLTGEDIRPVAEHLSSPEDIILYHNLKQPAGR
DWCQVSNGGCEFMCLAAPQVGRHPPRYTCVCPDNMTLARDMRRCVPVVPTPARPVTTRPE
IVQPPTTPTTTAKPLIPTTTQAPVVVHKPVTTPPPTPVTHPAPSTTKPTVKMTAAPSTPR
PKAVTSTTVPPRAQTTSQVPVTTSDSRHVVGAIPSTASSTPIALYITLPLVIVCMVIVGG
LLLWRNYRLKNTNTIHFDNPVYQKTTEDQVRIWRSSSFDAGYIYPKRQIVDLNEEADNPA
FTEN
NT seq
2715 nt
NT seq
+upstream
nt +downstream
nt
atgggacgactgctttacgcatacgtcgttttcctcatcttcaccatttatcaaacaagt
gctttcattacctgtgggacgagacagttccaatgtggcaatgggaaatgcattacggcc
agatgggtttgtgatggaacagacgactgtggtgacggcacagacgagctccctggcacc
tgcttggctaaatcgtgtagacctacagagttcacctgcgcagaccgactgaaccagtgt
atcccaaagagctggcaatgtgacggaaaggcggactgtgagaacggagcagatgaggag
agttgtgctcccaaacagtgcacagactcagagttcaggtgcgggacaggccagtgtgtc
tcctcttcgtttgtgtgtgatgaagagtcggactgtgaggatggcagtgatgaggcgtca
tgccccccgatcacctgtagctccgctagcttcaggtgtaacagctcggcctgtatcccc
cgcttatgggcctgtgacggggatttggattgcagcgatgggtctgacgagtggccctct
aattgcgggtcccggaccactgtggcggccaagagctgctccgctctagagttcaagtgt
ggcagtggcgagtgcatccacagcaactggaagtgtgatggaggggtggactgcatggac
agatccgatgaagcgaactgtgctcgcacgacttgccgtcctgatgagtttgaatgtgga
gatgggacttgtatccacgggagccaccagtgcaaccaccagtacgactgtcaggacatg
agcgatgagctgggctgtgtcaatgtgacacagtgcgagggccctcaaaagttcagatgt
cgtagtggggagtgcatccaaatggacaaagtgtgtgacaggaagagggactgcagggat
tggtccgatgagccgctcagagaatgtggcaaaaatgagtgtctcttcagcaatggcggc
tgctcacacatctgtaatgaccttaagattggatatgagtgcctttgcccatccgggttc
tatctggttgatagaaagagatgtgaagacatcgatgagtgtgccaatccagacacctgc
agtcagatctgcataaatcagattggcagttacaaatgccagtgtgaggagggatatcaa
gtcgaccctgccaccaaagcctgcaaagctattggtactatagcttacctgttctttacc
aaccgtcatgaggtcaggaaaatgaccctggacaagagtgagtacactagagtcatcccc
cgactgaaaaacgcagtggctctggacatgaatatggccaccaaggacatatactggtct
gacatctctcaaaagaagatctacagagctcagatggatttggctgagaacccctcaagt
cataacatactcatcagtactgacattgaggctcccgagggaatcgcctttgactggatc
cacaggaacctgtactggactgacagcatccgcagcactatctctgtagtaaccgctgat
gggacacgccgaaaaactctcttttaccaaggactgtccaagccccgggccattgtggtt
gaccctcacagcaacttcctgtactggacagactggggtaaccctgctaagattgagaag
ggtggactgaatggagtggaccgcactgctctggtcactgacaacatcgagtggcccaat
ggcatcactctggacctgttgaaccagcggctgtactgggtggactccaagttacacact
ctctccagtatcgatgtgcaaggcggggggcggcgcacccttattattgacgaagagcag
ctggctcacccactgggactgactgtgtttgaggagagagtattttggactgacgtcagt
aacaatgccatcctaagtgcaaacagactgaccggagaggacatacgaccagtggccgaa
cacctctcatcacccgaggacattattttgtaccataacctcaagcagcctgctggcaga
gactggtgccaagtgtccaacggtggctgtgagttcatgtgtctggcagcccctcaggtg
gggagacaccccccacgatacacctgtgtgtgtcctgacaacatgacgctcgcccgagac
atgaggagatgtgttcctgtcgtccccacacctgcccgtcctgtcaccaccaggcccgag
attgtgcagccccccaccacacccacaaccacagctaagcccctgatccccaccaccacc
caggcccctgtagtggtccataaaccagtgaccacacctccccccacacctgtgacccac
ccagctccaagcaccactaaacccaccgtgaagatgactgctgcacccagcaccccccga
cctaaagctgtgacttccactactgtgcctcccagagcccagaccacctcccaggttcca
gtcactacctcagactccagacatgtcgttggagctatacccagtacagcctcaagtacc
cccatcgctctgtacatcactctgcctttagtcatcgtctgtatggtgattgttggtgga
ttgctgctgtggagaaactatcgacttaagaacaccaacacgattcactttgacaaccca
gtgtaccagaagacaaccgaggaccaggtgcgcatctggaggagcagcagttttgatgct
ggttacatatatccaaaaagacaaatagttgacttgaatgaagaagcagacaatccagcc
ttcactgaaaactga
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