Boleophthalmus pectinirostris (great blue-spotted mudskipper): 110172564
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Entry
110172564 CDS
T05002
Name
(RefSeq) low-density lipoprotein receptor-like
KO
K12473
low-density lipoprotein receptor
Organism
bpec
Boleophthalmus pectinirostris (great blue-spotted mudskipper)
Pathway
bpec03272
Virion - Hepatitis viruses
bpec04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
bpec00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
110172564
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110172564
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
bpec04131
]
110172564
Membrane trafficking [BR:
bpec04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
110172564
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
TMEM154
Psg1
DUF5050
Mucin
AJAP1_PANP_C
Motif
Other DBs
NCBI-GeneID:
110172564
NCBI-ProteinID:
XP_020794108
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MFRTRRGLGTLALCCCLVMLLQSVADAANTCRANQLQCDNGRCITIKWICDGRDDCGDGT
DERPATCANKTCSQSEFNCGPPMNQCIPGGWHCDGQADCKNGADEEHCSAKKCKDSEFKC
ANGQCISNSFVCDKEADCSDGSDEVSCPKPTCGPNSFQCNNSVCVPLLWRCDGDADCADG
SDEWPQTCAGQDVAKPAQCGSHQFQCDDGKCIHRIWRCDNSPDCDDESDEVNCTRPACHL
DEFQCTDGTCIHGSRQCNRVFDCSDQSDEAGCDIENDCEGPTKFKCKNGECISADKVCDS
NTDCKDGSDETTECGLNECSDGNGGCSQICNDLSLGFNCSCATGYRLKADKKTCEDIDEC
AMPDTCSQICINFDGGYRCDCKQGYEIDPATGTCKAGSGSAPMLYFTSRHELRVMTVDRS
EYIRLIPELKNAVALDVNIPTKTIFWSDLSLKKIYSTNVDTAGNSSTHTVVIGSGIEAPE
GIAVDWIHGNIYWTDSELKTISVATTDGSKRKSLISENLEKPRAITVDPVNNFMYWTDWG
EQAKIEKSGLNGADRVAIVTDNIMWPNGITLDMVNQRLYWVDSKMHTLSSVDVSGGSRHT
LVVSEKHLTHPVSLAVFEEKVFWTDTGNGAVYSANRLTGGDITELAKDLNHPEDIIVYHK
LKQTNGTNWCQMNSSRNGGCEFLCLPAPRINSRSPQYTCACPDHMTLAAGNRKCVGPVNP
PVTTAAPPAKVPTTQAPPQPTTTTTTTTTTTTTSTTTTSTAAPPQTTTSKTPKLLATEHV
NNKLSGTPTEDESSHPIAVYIVVPILVMSLLIFGAVLLWRNWRLKNTNTIHFVNPVYQKT
TEDEVHICQNTSQGYVYPERTMLSMEDMDVA
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtttaggacgcggagaggacttggcacgctcgccctttgctgctgcctggtgatgctg
ttacagagtgtggcagatgctgcaaacacctgccgtgctaaccagctgcagtgtgataat
gggaggtgtatcaccatcaagtggatctgtgacggaagagacgactgtggagacggcact
gacgagaggccagccacatgtgcaaacaagacttgttcacaatcagagttcaattgtggc
cctcccatgaaccagtgtataccaggtggctggcactgtgatggtcaggccgactgcaag
aacggagctgatgaggaacactgctctgccaaaaagtgcaaggacagtgagttcaaatgc
gcaaacggccagtgcatatcaaattcatttgtgtgtgacaaagaagcagattgcagtgac
ggttcagatgaggtctcctgtcccaaacccacatgtggcccgaactccttccagtgtaac
aactcagtgtgtgtcccgttgctatggcgatgtgatggggatgcagactgtgccgatggg
tccgatgagtggccccaaacatgtgcaggacaagacgtggcgaagccagcacagtgcggc
tcacaccagttccagtgtgatgatgggaaatgcattcacagaatatggcgctgtgacaac
agcccagactgtgacgatgaatctgacgaggttaattgcactcggcccgcctgtcacctg
gatgagttccagtgcactgatggtacatgtatccatggcagccgtcagtgtaaccgagtg
ttcgactgcagcgaccaaagtgatgaagctggctgtgatatagaaaatgactgtgagggc
cccaccaagtttaaatgtaaaaatggggagtgcatcagtgcggacaaagtgtgtgactca
aacaccgactgcaaggatgggtccgatgaaacaactgaatgtggtttaaatgaatgctct
gatggaaatggtggctgttcccaaatatgcaacgatttgagtcttggattcaactgttcc
tgtgcaacaggatacagactaaaggcagataagaagacatgtgaagatattgacgagtgc
gctatgccagacacttgtagtcaaatctgtatcaactttgacggtggctacagatgtgac
tgtaagcagggctatgagatcgaccccgcgacaggcacatgcaaagctgggtcaggatct
gcccccatgttgtacttcaccagcagacatgagctgagggtgatgacagtggaccgcagt
gaatacatacgcctcatcccagaactcaagaatgcagtcgctctggatgtgaacatacca
acaaagaccatcttttggtccgatctctctctaaaaaagatatacagcacaaatgtagat
actgcgggtaactcctccacccacactgtagtgattgggagtgggattgaagccccagag
ggaattgcagtagactggatccatgggaacatttactggacggacagtgagctgaaaact
atttccgtggcaacaactgacggaagcaagagaaagtccctgatctctgaaaatttagaa
aagcccagagccatcacagtggaccctgtcaataacttcatgtactggacggactggggt
gagcaagctaaaattgagaagagtggactgaatggtgctgaccgcgttgccatagtgacg
gacaatattatgtggcccaatggcatcactcttgacatggttaatcagcgcttgtattgg
gtcgactccaagatgcacactctctccagtgtagatgtcagcggaggctcccggcataca
cttgttgtcagtgagaagcacctcacccatcccgtgtctctggcagtttttgaggagaaa
gtgttctggactgacactggaaacggtgctgtctacagtgccaatcgtttgactggtgga
gacatcacagagctggccaaagatctgaaccatcccgaagacattattgtgtatcacaag
ctcaagcagaccaacggaacaaactggtgccaaatgaacagcagcagaaatggaggctgt
gagttcctctgtctccctgcccctcgcattaacagccgctccccccagtacacatgtgca
tgtcctgatcacatgaccttggctgccggtaacaggaagtgtgttggtccagttaaccct
cctgtgaccaccgctgcaccaccagctaaagtgcccaccactcaagctccacctcagcct
actactactactactactacaaccacaaccacaactacttctacaactactacttcaact
gcagctccaccgcaaactacaacttcaaagacacctaagctactcgcaactgaacacgtg
aataacaaattgtctggaacgcccactgaagatgagtcctcccatcctattgctgtttac
attgttgtacccattttggtcatgtcactgttaatctttggtgctgtgttgctgtggaga
aactggcgtctaaagaacaccaatactatccacttcgtcaacccagtgtatcagaaaact
accgaggacgaggtgcacatttgtcaaaacacttcacagggctacgtctatcccgagagg
acaatgctgagtatggaagacatggatgttgcgtga
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