Paraburkholderia phymatum: Bphy_4358
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Entry
Bphy_4358 CDS
T00704
Name
(GenBank) malate dehydrogenase
KO
K00024
malate dehydrogenase [EC:
1.1.1.37
]
Organism
bph
Paraburkholderia phymatum
Pathway
bph00020
Citrate cycle (TCA cycle)
bph00270
Cysteine and methionine metabolism
bph00620
Pyruvate metabolism
bph00630
Glyoxylate and dicarboxylate metabolism
bph00680
Methane metabolism
bph00710
Carbon fixation by Calvin cycle
bph00720
Other carbon fixation pathways
bph01100
Metabolic pathways
bph01110
Biosynthesis of secondary metabolites
bph01120
Microbial metabolism in diverse environments
bph01200
Carbon metabolism
Module
bph_M00009
Citrate cycle (TCA cycle, Krebs cycle)
bph_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
bph_M00012
Glyoxylate cycle
bph_M00168
CAM (Crassulacean acid metabolism), dark
bph_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
bph00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Bphy_4358
00620 Pyruvate metabolism
Bphy_4358
00630 Glyoxylate and dicarboxylate metabolism
Bphy_4358
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
Bphy_4358
00720 Other carbon fixation pathways
Bphy_4358
00680 Methane metabolism
Bphy_4358
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
Bphy_4358
Enzymes [BR:
bph01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.37 malate dehydrogenase
Bphy_4358
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Gene cluster
GFIT
Motif
Pfam:
Ldh_1_C
Ldh_1_N
Motif
Other DBs
NCBI-ProteinID:
ACC73473
UniProt:
B2JQD2
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All DBs
Position
2:complement(1385865..1386848)
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AA seq
327 aa
AA seq
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MAKPAKRVAVTGAAGQIGYSLLFRIANGDMLGKDQPVILQLLDLPQAQAAVKGVVMELED
CAFPLLAGVVVTDDPKVAFKDADVALLVGARPRSKGMERKDLLSANAEIFTVQGKALNEV
ASRDVKVLVVGNPANTNAYIAMKSAPDLPKKNFTAMLRLDHNRALSQLAAKSGKPVSSIE
KLVVWGNHSPTMYPDFRVATAEGQDLTKLINDEEWNRNTFIPTVGKRGAAIIEARGLSSA
ASAANAAIDHVRDWVLGTNGKWVTMGIPSDGSYGIPEDIVYGVAVTCENGEYKRVEGLQI
DAFSREKMDNTLNELLEERDGVQHLLG
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcccgcaaagcgcgttgccgtcaccggcgccgcaggtcaaatcggttactcc
ctgctgttccgcatcgccaatggcgacatgctcggcaaggatcagccggtcatcctgcaa
ctgctggacctgccgcaggcgcaagccgccgtcaaaggcgtcgtgatggaactcgaagac
tgcgcgttcccgctgctcgcgggtgtcgtggtcactgacgatcccaaggtcgcattcaag
gatgccgacgtcgcgctgctggtcggcgcacgtccgcgttcgaaaggcatggagcgcaag
gacctgctgtcggccaacgccgaaatcttcacggtgcaaggcaaggcgctgaacgaagtg
gcgagccgcgacgtgaaggtgctggtcgtcggcaacccggcaaacacgaacgcctacatc
gcgatgaagtcggcaccggacctgccgaagaagaacttcacggccatgctgcgtctggac
cacaaccgcgcgctgtcgcaactggctgccaagtcgggcaagccggtttcgtcgatcgaa
aagctggtcgtgtggggcaaccactcgcccacgatgtaccccgatttccgcgtcgcaacg
gcagaaggccaggatctgaccaagctgatcaacgacgaagaatggaaccgcaacacgttc
atcccgacggtcggcaagcgcggcgcggcgatcatcgaagcgcgcggcctgtcgtcggcg
gcttcggcggctaacgcagccatcgaccacgtgcgtgactgggtgctcggcacgaacggc
aagtgggtgacgatgggcattccgtcggacggctcgtatggcatccccgaagatatcgtc
tacggcgtcgcggtgacgtgcgaaaacggcgagtacaagcgtgtcgaaggcctgcagatc
gacgcgttctcgcgcgagaagatggacaacacgctgaacgagttgctcgaagagcgcgac
ggcgttcagcatctgctcggctaa
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