KEGG   Battus philenor (pipe-vine swallowtail): 137926801
Entry
137926801         CDS       T10485                                 
Symbol
DNAlig4
Name
(RefSeq) DNA ligase 4 isoform X1
  KO
K10777  DNA ligase 4 [EC:6.5.1.1]
Organism
bphi  Battus philenor (pipe-vine swallowtail)
Pathway
bphi03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:bphi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    137926801 (DNAlig4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:bphi03400]
    137926801 (DNAlig4)
Enzymes [BR:bphi01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     137926801 (DNAlig4)
DNA repair and recombination proteins [BR:bphi03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA Ligase 4 complex
     137926801 (DNAlig4)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N RNA_ligase BRCT DNA_ligase_IV DNA_ligase_A_C POLR3C_WHD
Other DBs
NCBI-GeneID: 137926801
NCBI-ProteinID: XP_068626603
LinkDB
Position
Unknown
AA seq 878 aa
MTSTNVLVPANEVLFEDLCAILDKIVNTKKKYEKSMILVNFIDDFKIKAAQITEPKDASF
YPILRLLLPSLERERHSYNLKERRLGNKLVQALAWDESSQNARMLLNYRSSNQSQTDFAT
VASNVLKYTVCETSNLTVGDINEILDNIANVTHGKSPSLEDIFTTVIKKINPRQLKWLLR
IILKDLKLNMGQTRIFAALDADAENYYNYCNNLKRVCLEFDGGNTRPSEMGVQIFHSVSP
MLLSALPITKYSILSTSKTYITEEKYDGERFQIHMKDNVFQYFTRKGHDIPNFGTSYESG
MLTPLLKGCFASDVESFILDGEMLGWNEEQGEYGSKGMNFDVKALKDDSVYKPSFVAFDI
LYYNGQSLVGPPENGGVTLMKRLDILDKVFQDVPEVITHSKWKLVKQNSDILDAFNKSVD
EDKEGITVKDTESYYLANRRGSDWYKIKGEYTKSTIQDLDLVIIGKTRSRRFYVACVDNS
GASARWLCMASVGHLGWAQYSALSARLQPHWRRAADYPPPSYLVFNNKHVDFWLPPENSV
VLQIRASELVKSENYGTPYTLRFQRVIKVRYDKPVKDILTLQEFEEIISPNTKVVKLNKT
INQEEIDSVAMIPHKKTPKKSIQVAEPFQSKPSGDVAVISQALRGRKICILSDDIDCSKA
DLIRIVESHGGKHTEKYGMDTWCCVAGRLTPYVKSTVTANAEIDIASTEWLRSLPAADEP
CSLSPFDMLTMKKETKLEMNLYYDNYGDSYRNPIDVDTLKKCLDKMNYVKPLVYLTINEK
MKVDKELFEEYNPFSFLRGCFLAFLKRNDIQSILARLYGANICDIDSSNVTHVIIPNMAS
KDIIADAKKIDVLLVGEEWLDTCFKEGRRVKENVFIVS
NT seq 2637 nt   +upstreamnt  +downstreamnt
atgacgtcaaccaatgttttagttccggctaacgaagtgttatttgaagatctgtgtgct
attttagataaaatagtaaacacaaagaagaagtatgaaaaatctatgattttagtgaat
tttattgacgattttaagataaaggcggcacaaataacggaacctaaggatgctagcttt
tatcccatccttaggttactgctgccgtctttagaacgtgaaaggcattcatataactta
aaagagaggagacttggaaataaattggtgcaggcattagcttgggatgaatcttcgcaa
aatgctcgaatgttgttaaactatcgatcaagtaatcaatcgcaaacggattttgccacc
gtcgccagcaatgtgttaaaatatacagtttgcgagacatcgaatctaacggttggagat
attaacgaaatactagataacattgcaaatgtgacacacggaaaatcaccttctctggaa
gatatattcactacggtaatcaagaagataaatcctaggcagttgaaatggctattgcgg
ataatattaaaagatttgaagctaaacatgggacagacacgtatatttgcagctctcgat
gcagatgcagagaattattacaattattgcaataatcttaagagggtctgtctggagttt
gacggagggaacacgcgtccatcagagatgggtgtacaaatatttcactcagtcagtccg
atgctgttgagcgctctgcctataactaagtattctatactttccacatctaaaacctac
ataactgaggagaaatacgacggtgaaaggtttcagatacacatgaaggataacgtattc
caatattttacaagaaaaggacacgatatccctaattttggaaccagttatgagtccggg
atgttgacccccttattaaaaggttgctttgcttcagacgttgaaagttttattcttgac
ggtgaaatgttgggatggaatgaagaacagggggaatatggatcgaaaggtatgaatttc
gatgtgaaggcccttaaagatgactcggtgtacaaacctagctttgtagcctttgatatt
ttgtactataacgggcaatcgttagtggggccgccggaaaatggaggcgtgactctaatg
aaacggcttgatattttggacaaagtgtttcaagacgttccagaagttattacacacagt
aagtggaaattagtgaaacagaattctgatatattagatgctttcaataaatccgttgac
gaagataaagaagggataacagtgaaagatactgaatcatattatctcgcaaatcgacga
ggcagcgactggtacaaaataaagggcgagtatacaaagagcacaatacaggatctcgat
cttgtgataatcggcaagacgcgttcacgaaggttctacgttgcgtgtgttgataattca
ggtgcgagcgcaaggtggctgtgcatggcgagcgtcggacacctggggtgggcacagtac
tccgcattgagtgcacgcctgcagccgcattggcgtcgcgccgccgactacccacctccg
tcttacctcgtcttcaacaacaaacacgtagatttctggctaccacctgaaaactccgtc
gtcttgcagatacgtgcttcggaactagtgaaaagtgaaaactacggcactccctatacg
ctacgcttccaacgcgtcattaaagttcgctacgacaaacctgtgaaagatattctgaca
ttacaagaattcgaagaaataatctcgccgaacacaaaagtggttaaacttaataaaact
attaatcaagaagaaatagacagtgttgccatgataccacacaaaaagactccgaaaaaa
agtattcaagtggcagagccgtttcagtccaagccctcgggcgacgtggccgtaatatct
caggctttgcgtggcagaaaaatttgtattctctctgatgacattgactgttctaaagca
gacctgatcagaatcgtggaatcgcacggcggaaaacatacagaaaaatatggaatggat
acatggtgttgtgtagcgggcaggctaacgccttatgtgaagtccactgtaacagcgaat
gccgagatagacattgcgagtacggagtggttgagatcacttcccgcggccgatgagccg
tgctccttgtcaccgtttgacatgttgactatgaagaaggaaactaaactggaaatgaat
ttgtactacgacaactatggagacagttacaggaatccgatagatgtagacaccttgaag
aagtgcctcgataaaatgaactacgttaaacccttggtatatctaacaataaacgagaaa
atgaaagtcgataaagagctatttgaagaatacaatccattctcgtttttgcgtggttgc
ttcttagcatttcttaaaaggaatgacattcaatcgattttagcgcgattgtatggcgct
aatatatgtgatatcgattcatctaacgtcactcatgtaatcataccaaatatggcgtca
aaggacatcatagcagatgccaagaaaatcgatgttctgttagtcggagaagaatggctg
gatacgtgttttaaggagggaagaagagtcaaagagaatgtatttattgtatcttaa

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