Battus philenor (pipe-vine swallowtail): 137926801
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Entry
137926801 CDS
T10485
Symbol
DNAlig4
Name
(RefSeq) DNA ligase 4 isoform X1
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
bphi Battus philenor (pipe-vine swallowtail)
Pathway
bphi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
bphi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
137926801 (DNAlig4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bphi03400
]
137926801 (DNAlig4)
Enzymes [BR:
bphi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
137926801 (DNAlig4)
DNA repair and recombination proteins [BR:
bphi03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
137926801 (DNAlig4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
BRCT
DNA_ligase_IV
DNA_ligase_A_C
POLR3C_WHD
Motif
Other DBs
NCBI-GeneID:
137926801
NCBI-ProteinID:
XP_068626603
LinkDB
All DBs
Position
Unknown
AA seq
878 aa
AA seq
DB search
MTSTNVLVPANEVLFEDLCAILDKIVNTKKKYEKSMILVNFIDDFKIKAAQITEPKDASF
YPILRLLLPSLERERHSYNLKERRLGNKLVQALAWDESSQNARMLLNYRSSNQSQTDFAT
VASNVLKYTVCETSNLTVGDINEILDNIANVTHGKSPSLEDIFTTVIKKINPRQLKWLLR
IILKDLKLNMGQTRIFAALDADAENYYNYCNNLKRVCLEFDGGNTRPSEMGVQIFHSVSP
MLLSALPITKYSILSTSKTYITEEKYDGERFQIHMKDNVFQYFTRKGHDIPNFGTSYESG
MLTPLLKGCFASDVESFILDGEMLGWNEEQGEYGSKGMNFDVKALKDDSVYKPSFVAFDI
LYYNGQSLVGPPENGGVTLMKRLDILDKVFQDVPEVITHSKWKLVKQNSDILDAFNKSVD
EDKEGITVKDTESYYLANRRGSDWYKIKGEYTKSTIQDLDLVIIGKTRSRRFYVACVDNS
GASARWLCMASVGHLGWAQYSALSARLQPHWRRAADYPPPSYLVFNNKHVDFWLPPENSV
VLQIRASELVKSENYGTPYTLRFQRVIKVRYDKPVKDILTLQEFEEIISPNTKVVKLNKT
INQEEIDSVAMIPHKKTPKKSIQVAEPFQSKPSGDVAVISQALRGRKICILSDDIDCSKA
DLIRIVESHGGKHTEKYGMDTWCCVAGRLTPYVKSTVTANAEIDIASTEWLRSLPAADEP
CSLSPFDMLTMKKETKLEMNLYYDNYGDSYRNPIDVDTLKKCLDKMNYVKPLVYLTINEK
MKVDKELFEEYNPFSFLRGCFLAFLKRNDIQSILARLYGANICDIDSSNVTHVIIPNMAS
KDIIADAKKIDVLLVGEEWLDTCFKEGRRVKENVFIVS
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcaaccaatgttttagttccggctaacgaagtgttatttgaagatctgtgtgct
attttagataaaatagtaaacacaaagaagaagtatgaaaaatctatgattttagtgaat
tttattgacgattttaagataaaggcggcacaaataacggaacctaaggatgctagcttt
tatcccatccttaggttactgctgccgtctttagaacgtgaaaggcattcatataactta
aaagagaggagacttggaaataaattggtgcaggcattagcttgggatgaatcttcgcaa
aatgctcgaatgttgttaaactatcgatcaagtaatcaatcgcaaacggattttgccacc
gtcgccagcaatgtgttaaaatatacagtttgcgagacatcgaatctaacggttggagat
attaacgaaatactagataacattgcaaatgtgacacacggaaaatcaccttctctggaa
gatatattcactacggtaatcaagaagataaatcctaggcagttgaaatggctattgcgg
ataatattaaaagatttgaagctaaacatgggacagacacgtatatttgcagctctcgat
gcagatgcagagaattattacaattattgcaataatcttaagagggtctgtctggagttt
gacggagggaacacgcgtccatcagagatgggtgtacaaatatttcactcagtcagtccg
atgctgttgagcgctctgcctataactaagtattctatactttccacatctaaaacctac
ataactgaggagaaatacgacggtgaaaggtttcagatacacatgaaggataacgtattc
caatattttacaagaaaaggacacgatatccctaattttggaaccagttatgagtccggg
atgttgacccccttattaaaaggttgctttgcttcagacgttgaaagttttattcttgac
ggtgaaatgttgggatggaatgaagaacagggggaatatggatcgaaaggtatgaatttc
gatgtgaaggcccttaaagatgactcggtgtacaaacctagctttgtagcctttgatatt
ttgtactataacgggcaatcgttagtggggccgccggaaaatggaggcgtgactctaatg
aaacggcttgatattttggacaaagtgtttcaagacgttccagaagttattacacacagt
aagtggaaattagtgaaacagaattctgatatattagatgctttcaataaatccgttgac
gaagataaagaagggataacagtgaaagatactgaatcatattatctcgcaaatcgacga
ggcagcgactggtacaaaataaagggcgagtatacaaagagcacaatacaggatctcgat
cttgtgataatcggcaagacgcgttcacgaaggttctacgttgcgtgtgttgataattca
ggtgcgagcgcaaggtggctgtgcatggcgagcgtcggacacctggggtgggcacagtac
tccgcattgagtgcacgcctgcagccgcattggcgtcgcgccgccgactacccacctccg
tcttacctcgtcttcaacaacaaacacgtagatttctggctaccacctgaaaactccgtc
gtcttgcagatacgtgcttcggaactagtgaaaagtgaaaactacggcactccctatacg
ctacgcttccaacgcgtcattaaagttcgctacgacaaacctgtgaaagatattctgaca
ttacaagaattcgaagaaataatctcgccgaacacaaaagtggttaaacttaataaaact
attaatcaagaagaaatagacagtgttgccatgataccacacaaaaagactccgaaaaaa
agtattcaagtggcagagccgtttcagtccaagccctcgggcgacgtggccgtaatatct
caggctttgcgtggcagaaaaatttgtattctctctgatgacattgactgttctaaagca
gacctgatcagaatcgtggaatcgcacggcggaaaacatacagaaaaatatggaatggat
acatggtgttgtgtagcgggcaggctaacgccttatgtgaagtccactgtaacagcgaat
gccgagatagacattgcgagtacggagtggttgagatcacttcccgcggccgatgagccg
tgctccttgtcaccgtttgacatgttgactatgaagaaggaaactaaactggaaatgaat
ttgtactacgacaactatggagacagttacaggaatccgatagatgtagacaccttgaag
aagtgcctcgataaaatgaactacgttaaacccttggtatatctaacaataaacgagaaa
atgaaagtcgataaagagctatttgaagaatacaatccattctcgtttttgcgtggttgc
ttcttagcatttcttaaaaggaatgacattcaatcgattttagcgcgattgtatggcgct
aatatatgtgatatcgattcatctaacgtcactcatgtaatcataccaaatatggcgtca
aaggacatcatagcagatgccaagaaaatcgatgttctgttagtcggagaagaatggctg
gatacgtgttttaaggagggaagaagagtcaaagagaatgtatttattgtatcttaa
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