Blattabacterium sp. BPLAN (Periplaneta americana): BPLAN_307
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Entry
BPLAN_307 CDS
T00996
Symbol
ligA
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bpi
Blattabacterium sp. BPLAN (Periplaneta americana)
Pathway
bpi03030
DNA replication
bpi03410
Base excision repair
bpi03420
Nucleotide excision repair
bpi03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bpi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BPLAN_307 (ligA)
03410 Base excision repair
BPLAN_307 (ligA)
03420 Nucleotide excision repair
BPLAN_307 (ligA)
03430 Mismatch repair
BPLAN_307 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bpi03032
]
BPLAN_307 (ligA)
03400 DNA repair and recombination proteins [BR:
bpi03400
]
BPLAN_307 (ligA)
Enzymes [BR:
bpi01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BPLAN_307 (ligA)
DNA replication proteins [BR:
bpi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BPLAN_307 (ligA)
DNA repair and recombination proteins [BR:
bpi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BPLAN_307 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BPLAN_307 (ligA)
MMR (mismatch excision repair)
DNA ligase
BPLAN_307 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BPLAN_307 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
HHH_2
HHH_5
BRCT
HHH
DNA_ligase_ZBD
BRCT_2
PTCB-BRCT
Motif
Other DBs
NCBI-ProteinID:
ACX83932
UniProt:
D0J9B1
LinkDB
All DBs
Position
324044..326080
Genome browser
AA seq
678 aa
AA seq
DB search
MKKDRNQKDIKEKIYQLRKKLSEYNYQYYALNTSEISDYNFDKKLRELFLLEKEHPEFYD
PSSPTLRIGVEGKKYADSSIYYHKYKMYSLQNTYSKKELMTWKKRIQKSISSSFVCELKY
DGVSINLIYKNGFLTHAVTRGDGKKGEEVIENVRTIQSIPLKLIGENHPEYLEIRGEIFL
PIKKFLEINAKRTRSGKNPYANPRNTASGTLKIQNSKEVYKRTLSCIVYSVRGKNLPFDT
QYQALQTLRNWGFEISEKVLLCKKIKEIFHFLDYWSQWKQTLPYQIDGIVIKVNEHQNQS
LLGYTNKYPRWAIAYKFRPKKLSETKLLNLKFQVGRTGIITPVAEVIPKKISGTIVKRVT
LYNHHFIQKMGIHYGDALLLEKGGDIIPKVAKINLKKRLINASPIYFLTKCPSCRSHLRK
KNESFYCPNNFCPSQNMRKIQHFVSERAMNIKGIGNEMIKKLYQKGFLYNISDLYQLKRE
KLLQIDGVKEKLADSLIKNIEKSKDNPSQRVLYALGIPHVGEYISKKLTEKFLNINSLIQ
ADEAQLTSISGIGKKISESIKTYFFTKENKKIVENLMKHGLNFSDFYKKNPVKNQYSPIE
GKSFLFTGKLSSMTRNKAKNLVELLGGRVFHTVNNQINFIVVGKNFGSKLERCMKKNHIK
ILTEDIFIKLLEQEKKEK
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaggatagaaatcaaaaagacatcaaagaaaaaatatatcagctaagaaaaaaa
ctttcagaatataattatcaatattatgccctgaatacttctgagatctctgattacaat
tttgataaaaaattaagagaattatttctattggaaaaagaacatccagaattctatgat
cctagctctccaactctgagaataggagtagagggaaaaaaatatgcagattcttccatt
tattatcataaatataaaatgtactctcttcaaaacacctattctaagaaagagttaatg
acttggaaaaaaaggattcagaaatccatttcttcttcttttgtctgtgaactaaaatat
gatggagtttctattaatttaatttataaaaacggctttttaactcatgctgtgactcgt
ggagatggaaaaaaaggagaagaagtcatagaaaatgtacggaccatacaatccattccc
ctaaaattaataggggaaaaccatccggaatatcttgaaatacgtggagagatttttctt
cctataaaaaagtttttagaaattaatgcgaaacgcacaagaagtggaaagaatccttat
gctaatcctagaaatacggcaagtggaactctgaaaattcagaatagtaaagaagtatat
aaacggactctatcttgtatcgtatactctgtaaggggaaaaaatttgccttttgataca
caatatcaagctttacaaaccctacggaattggggttttgaaatatcagaaaaggtttta
ctttgtaaaaaaatcaaggagatatttcattttctggactattggagtcaatggaaacaa
acacttccctatcaaattgatggaatagtcattaaggtcaatgaacatcagaatcaatcc
cttttaggatatacgaataaatatccccgttgggctatagcttacaaatttagaccaaaa
aaattatcggagacaaaattattaaacctgaaatttcaagtaggacgcactggaatcatt
actcctgtagccgaggtgatcccaaaaaaaatttctggaacaatagtgaaaagagtgacg
ctttataatcatcattttattcaaaaaatggggattcattatggagatgctcttttatta
gaaaaaggaggggatattattcctaaagtagctaaaataaatttaaaaaaaagattaatc
aatgcctctcctatatatttcttaacaaaatgtccctcatgtaggagccatttaagaaaa
aaaaatgaatcgttctactgtccaaataatttttgtccttctcaaaacatgagaaaaata
caacactttgtgagtgaaagagctatgaatataaaaggaattggaaatgaaatgataaaa
aaattgtaccaaaaaggttttttatataatatttccgatttatatcaattaaaaagggaa
aaacttcttcaaatagatggagtgaaagaaaaattagcagattctttaataaagaacata
gaaaaatccaaagataatccctctcaaagagtcttatatgctttaggaattcctcatgta
ggagaatatatttctaaaaaattaacagaaaaatttttaaatataaattccttaatacag
gcggatgaagctcaattaacctctatttcaggaataggaaaaaaaatttccgaaagtata
aaaacttattttttcactaaagagaacaaaaaaattgtggaaaacctgatgaaacatgga
ttaaatttttccgatttctataaaaaaaatcctgtaaaaaaccaatattctcctattgaa
ggaaaatcttttttatttacaggaaaactgtccagtatgacccgtaataaggctaaaaac
ttggtagaacttttaggaggaagagtatttcatacggtgaataaccaaattaattttatt
gttgtaggaaaaaactttggttctaaacttgaaagatgtatgaaaaaaaaccatataaaa
attttaacggaagatatttttattaaactccttgaacaagaaaaaaaagaaaaataa
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