KEGG   Beta proteobacterium CB: D521_1265
Entry
D521_1265         CDS       T02483                                 
Name
(GenBank) DNA ligase, NAD-dependent
  KO
K01972  DNA ligase (NAD+) [EC:6.5.1.2]
Organism
bprc  Beta proteobacterium CB
Pathway
bprc03030  DNA replication
bprc03410  Base excision repair
bprc03420  Nucleotide excision repair
bprc03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:bprc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    D521_1265
   03410 Base excision repair
    D521_1265
   03420 Nucleotide excision repair
    D521_1265
   03430 Mismatch repair
    D521_1265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:bprc03032]
    D521_1265
   03400 DNA repair and recombination proteins [BR:bprc03400]
    D521_1265
Enzymes [BR:bprc01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.2  DNA ligase (NAD+)
     D521_1265
DNA replication proteins [BR:bprc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     D521_1265
DNA repair and recombination proteins [BR:bprc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA ligase
     D521_1265
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     D521_1265
   MMR (mismatch excision repair)
    DNA ligase
     D521_1265
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      D521_1265
SSDB
Motif
Pfam: DNA_ligase_aden OB_DNA_ligase HHH_2 Nlig-Ia BRCT HHH_5 DNA_ligase_ZBD HHH PTCB-BRCT BRCT_2 FrhB_FdhB_C
Other DBs
NCBI-ProteinID: AGG33833
LinkDB
Position
complement(1243495..1245465)
AA seq 656 aa
MQTELARLEHAYYVLDNPIVPDSEYDRLYRELIEIEVSHPEWITSDSLSQRVGGAALKEF
DSVTHAVPMLSLNNAFEDAELIAFDRRCREGLHIDQVDYAGELKFDGLAISLRYEHGSLV
RAATRGDGASGEDVTANIKTIRAIPLKLSGDNIPKVLEVRGEVFMYLKDFQKMNEQAAAQ
GEKEFANPRNAAAGSLRQLDSKITAKRPLSFFAYGLGALEPQSWLPKTHEELLNAYVKLG
LPVCSERRVLKSVEEILAFYNEVGAKRDELPYDIDGVVYKVNSFAEQAKLGFVSRAPRFA
LAHKFPAQEALTTVLGIDVQVGRTGAITPVARLSPVEVGGVTVTNATLHNEDEVKRKDVR
IGDTVSVRRAGDVIPEVVSVVKERRPVGATEFVMPKNCPVCDSHIERLADEAVARCSGGL
FCGAQRKQALIHFAHRRALDIEGLGEKIVDQLVDHNLVRTPADLYRLGFTAIANLERMGE
KSADNLIAAINQSRNTTLARFIFALGIRHVGETTAKDLANHYQSMHALMDASLEDLLTVK
DVGPVVANSITSFMEEAHNREVIEQLLASGMQLSVEEKVISAAVAGKTFVLTGTFPTMTR
DQAKDLLEKAGAKVAGSVSKKTDYVVAGADAGSKLTKAEELGVPVIDEVAMVDLLK
NT seq 1971 nt   +upstreamnt  +downstreamnt
ttgcagaccgagttagcacgcctagagcatgcttactatgttctggataaccccatagtt
ccggatagtgagtacgaccgtctatatcgagagctcattgagatagaggtaagtcatcca
gaatggattacttcagactcactctcgcaaagagtgggtggtgcagctttaaaagagttt
gactccgttacccatgcagtgccgatgctttctttgaataatgcttttgaggatgctgag
ctgattgcttttgaccgccgctgccgtgagggtctccatattgaccaggtggattatgcg
ggtgagctgaaatttgatggtctagcgatctcactacgctatgagcatggctccttagta
agagcagccactcgtggtgatggtgctagcggtgaagatgtcactgccaacatcaaaacg
attcgggctattccgctgaagctctctggggacaatattccaaaagtattagaagtacgc
ggtgaagtctttatgtatctcaaagacttccagaaaatgaatgagcaagcagctgcccaa
ggtgagaaggagttcgccaaccctcgtaatgcagcagcgggtagtttgcgtcaattagat
tctaagatcaccgccaaaagaccgctatcgttctttgcttatggactcggtgcactagag
ccccaatcttggctaccaaaaacacacgaagaattactcaatgcttacgtaaaactcggc
ttaccagtttgttcagagcgccgcgttctcaaatccgtagaagagatattggccttttat
aacgaggttggtgccaaacgtgacgaacttccttatgacatcgatggcgtcgtctataag
gtcaactcttttgcggagcaggctaagctgggctttgtatctagagccccgcgctttgct
ttagcccataaatttccagcacaagaggctttgactactgttttgggcatcgatgtgcag
gtaggtcgcacgggcgccatcactccagttgcaagactttctcctgtagaggttggcggt
gttaccgtcactaacgctactctccacaatgaagatgaagtaaagcgcaaagatgtgcgt
attggcgataccgtttcagtgcgaagagcaggggatgttattccggaagtggtttcggta
gtcaaagaacgtcgaccagtaggtgccacagaattcgtaatgccaaagaattgtccggta
tgtgattcacatatcgagcgattggcagacgaggctgtagctcgttgtagtggcggctta
ttttgcggtgcacagcgcaagcaagcattaatccattttgcccacagaagagcattggat
attgaaggtctgggcgagaagattgttgatcaattagttgatcacaatctagtcagaact
ccggctgatctctatcgtctcggctttactgcaatcgccaacctagagcgcatgggcgag
aagtcggctgataacctcatcgctgcaatcaatcaatccagaaacacgacgctggcgaga
ttcatctttgcattgggtattcgtcatgtgggcgagaccactgccaaagacttggctaat
cactatcaatccatgcatgccctgatggatgccagtctcgaagacttactgacggttaaa
gacgttggccccgtagtagccaactctatcactagctttatggaagaagctcataaccgc
gaagtgattgagcaactcctggcctcaggcatgcagctctctgtagaagaaaaagtcatc
agcgcagccgtagctggaaaaacctttgtgctcacaggtacattcccaaccatgacaaga
gatcaagccaaggacctgcttgaaaaagcaggcgctaaagtcgctggctcagtctccaag
aaaaccgactacgtagttgctggagcagatgctggcagcaaactcactaaagctgaagag
ctaggtgttccagtgattgatgaagtggctatggtagatctccttaagtag

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