Burkholderia pseudomallei MSHR511: BBQ_2342
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Entry
BBQ_2342 CDS
T03012
Symbol
nth
Name
(GenBank) endonuclease III
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
bpsm
Burkholderia pseudomallei MSHR511
Pathway
bpsm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bpsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BBQ_2342 (nth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bpsm03400
]
BBQ_2342 (nth)
Enzymes [BR:
bpsm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BBQ_2342 (nth)
DNA repair and recombination proteins [BR:
bpsm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BBQ_2342 (nth)
Prokaryotic type
BBQ_2342 (nth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
HHH_8
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AHG33336
LinkDB
All DBs
Position
1:2693093..2693737
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AA seq
214 aa
AA seq
DB search
MNATKRRAIFETLQSLNPHPTTELEYTTPFELLIAVMLSAQATDVSVNKAMRKMFPVANT
PKKIVALGEEGVADYIKTIGLYRTKAKNVVAASRILLEQYGGEVPAEREALESLPGVGRK
TANVVLNTAFGQPTIAVDTHIFRVANRTGLAPGKDVRAVEAALEKLTPKEFLHDAHHWLI
LHGRYVCKARKPECWHCAIEPLCEYRPKTPAPMQ
NT seq
645 nt
NT seq
+upstream
nt +downstream
nt
atgaacgccaccaaacgacgcgcgatcttcgaaacgctgcagagcctcaacccgcatccg
accacggagctcgaatacacgacgccgttcgagctgttgatcgccgtgatgctgtcggcg
caggcaaccgacgtatcggtcaacaaggcgatgcgcaagatgttcccggtggccaacacg
ccgaagaagatcgtcgcgctcggcgaggaaggcgtcgccgactacatcaagacgatcggc
ctctaccggacgaaggcaaagaacgtcgtcgcggcgagccgtatcctgctcgagcaatac
ggcggcgaagtccccgccgagcgcgaggcgctcgagagcctgccgggggtcggccgcaag
accgcgaacgtcgtgctgaacaccgcgttcggccagccgacgatcgccgtcgacacgcac
atcttccgcgtcgcgaaccgcacggggctcgcgcccggcaaggacgtgcgcgcggtcgag
gcggcgctcgagaagctcacgccgaaggaattcctgcacgacgcgcatcattggctgatc
ctgcacggacgctacgtgtgcaaggcgcgcaagcccgaatgctggcattgcgcgatcgag
ccgctttgcgagtacaggccgaagacgcccgcgcccatgcagtga
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