Paraburkholderia phenoliruptrix: BUPH_02741 Help Entry BUPH_02741        CDS       T02300                                  Name (GenBank) DNA ligase (NAD+)   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism bpx  Paraburkholderia phenoliruptrix Pathway bpx03030   DNA replication bpx03410   Base excision repair bpx03420   Nucleotide excision repair bpx03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bpx00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     BUPH_02741    03410 Base excision repair     BUPH_02741    03420 Nucleotide excision repair     BUPH_02741    03430 Mismatch repair     BUPH_02741  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:bpx03032]     BUPH_02741    03400 DNA repair and recombination proteins [BR:bpx03400]     BUPH_02741 Enzymes [BR:bpx01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      BUPH_02741 DNA replication proteins [BR:bpx03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      BUPH_02741 DNA repair and recombination proteins [BR:bpx03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      BUPH_02741    NER (nucleotide excision repair)     GGR (global genome repair) factors      BUPH_02741    MMR (mismatch excision repair)     DNA ligase      BUPH_02741   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       BUPH_02741 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT HHH_5 DNA_ligase_ZBD Nlig-Ia PTCB-BRCT HHH BRCT_2 Hint Motif Other DBs NCBI-ProteinID:  AFT86323 UniProt:  K0DQY1 LinkDB All DBs Position 1:complement(2621103..2623169) Genome browser AA seq 688 aa AA seqDB search MARTPASNPATSAPAERAAWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIEAQHP DLIVPDSPTQRVGGEAASGFEPVVHDQPMLSLNNGFADEDIVAFDKRVGDALGNNAKEPP VPVDYATELKFDGLAISLRYVDGVFVQAATRGDGTTGENVTENIRTVRSIPLKLKGKRVP HILDVRGEVLMFKRDFERLNERQRAAGHKEFANPRNAAAGSLRQLDPKITAQRPLSFFAY GIGVLDGMEMPATHSELLDWYKELGLPVNSERAVVKGAEGLLAFFRAVGEKRDKLPYDID GVVYKVNRRDEQDALGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEP VFVGGATVTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSALLDRRPDDAREFVMP THCPVCGSSIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQ HLVRTPADLFNLGFSTLAELDRFADKSAQNLLDSLEKAKHTTLARFIYALGIRHVGESTA KDLAKHFGSLNPIMDASVEALLEVNDVGPVVAESIHQFFAEEHNRTVIEQLRAPGKVTWP EGPPAPKAPQGVLAGKTIVLTGTLPTLAREEAKEMLEAAGAKVAGSVSKKTDYVVAGAEA GSKLAKAEELGIPVLDEDGMRKLLEGQS NT seq 2067 nt NT seq  +upstreamnt  +downstreamnt atggctcgaactcccgcctcgaatccagcaaccagcgctccggccgagcgtgccgcgtgg ctgcgcgcggaacttgaacgcgccaactacgcgtactacgtgctggaccaacccgacttg cccgacgcggaatacgacaagctgttcaaggaactggaaagtatcgaggcgcagcatccg gatctgatcgtgccggattcgcccacgcagcgggtgggcggcgaggcggcgagcggcttc gagcccgtcgtccatgatcagcccatgctgtcgctcaacaacggtttcgccgacgaagac atcgtcgcgttcgacaaacgcgtgggcgacgcgctcggcaacaatgcaaaggaaccgccg gtgccggtcgactatgcgacggagctgaaattcgacggcctcgccatttcgctgcgctat gtcgacggcgtgttcgtgcaggccgccacgcgcggcgacggcacgaccggcgagaacgtg acggaaaacatccgcaccgttcgctccattccgctcaaactgaagggcaagcgcgtgccg cacatactcgacgtgcgaggcgaagtgctgatgttcaagcgcgacttcgagcgcctgaac gaacggcagcgtgcggcgggccataaggaattcgccaatccgcgcaatgccgccgcgggc agcctgcgccagctcgacccgaagatcaccgcgcaacggccgctgtcgttcttcgcgtat ggcatcggcgtgttggacggtatggagatgccggccacgcatagcgaactgctcgactgg tacaaggaacttggcctgccggtcaactcggagcgcgcggtcgtgaagggcgcggaaggt ttgctggcgtttttccgcgcggtgggcgagaagcgcgacaagctgccgtacgacatcgac ggcgtggtgtacaaggtcaaccggcgcgacgaacaggacgcgctcggctttgtatcgcgt gcgccgcgttttgcgctcgctcacaagtttccggcgcaggaagcgctcacgaagctcgtc gccatcgacgtgcaggtgggccgcaccggtgcgattacgccggtcgcgcggctcgagccg gtgttcgtcggcggcgccacggtcaccaatgcgacgctgcataacgaagacgaagtgcgg cgcaaagacatccggatcggcgacacggtgatcgtgcggcgcgccggcgacgtgatcccg gaggtggtgagcgcgcttctcgaccgtcgtcctgacgacgctcgcgagttcgtcatgccc acgcattgtccggtgtgcggctcgagcatcgagcgtctgcctgacgaggcgattgcgcgt tgcacgggcggcctgttctgtccggcgcagcgcaaacaggcgctgtggcatttcgcacag cggcgggccttggacatcgacggactgggcgaaaaaatcatcgatcaactggtcgaacag cacctcgtgcgcacgcccgccgacctgttcaacctcggcttctcgacgcttgcggagttg gaccgtttcgccgacaaatccgcgcagaacctgctcgactcgctcgaaaaggccaagcac actacgcttgcccgtttcatctacgcgctcggcatccggcatgtcggcgaatccacggcg aaagatctggcgaaacacttcggctcgctcaatccgatcatggatgcgtcggtggaggcg ctgctcgaggtcaacgacgtggggcccgtcgtggccgaatcgatccaccagttttttgcc gaagagcacaaccgcacggtgatcgagcagttgcgcgcgccgggcaaagtcacgtggccc gaaggtccgcccgcgcccaaggcgccgcaaggtgtgctggccggcaagacgatcgtgctg accggcactttgccgactcttgctcgcgaagaggccaaggaaatgctcgaagcggcgggc gccaaagtggccggatcggtgtcgaagaaaacagattatgtggtggcgggagccgaagct ggcagcaagttggcgaaggccgaggaactcggcattccggtactcgacgaagatggtatg cgtaagctcctggaggggcagtcatga

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