KEGG   Paraburkholderia phenoliruptrix: BUPH_04890
Entry
BUPH_04890        CDS       T02300                                 
Name
(GenBank) type IV secretion system protein VirD4
  KO
K03205  type IV secretion system protein VirD4 [EC:7.4.2.8]
Organism
bpx  Paraburkholderia phenoliruptrix
Pathway
bpx03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:bpx00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    BUPH_04890
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:bpx02044]
    BUPH_04890
Enzymes [BR:bpx01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     BUPH_04890
Secretion system [BR:bpx02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   BUPH_04890
SSDB
Motif
Pfam: T4SS-DNA_transf TraG-D_C TrwB_AAD_bind
Other DBs
NCBI-ProteinID: AFT90438
UniProt: K0E1U5
LinkDB
Position
pSYMBR3459:543281..545086
AA seq 601 aa
MSHTYPPFIVGKFKGEYLKYRGQDFLMLAAGTRSGKGVSMVIPNLLTYPDSVVVEDIKEE
NFMYTSGYRRKCGHEVYLWSPFSENGRSHAYNPLEYIAGRPAYTRVGDVMTIGEHLYPSN
VDARLRYWNDNARNLFIGIVLYLLETPSLPCTFGEVLRQASGKGRAIREHVSSIVSTRAN
ATDTLPALSFECLDALNRFLSQSREAFANIVSTMTAPLNVFSNPVVDAATSRSDFHLGEV
RKKRISIYVGIKPGDLKAGALLVNLFFSQLIDLNTREQPAENPELKYQCALMMDEFAAPG
KIDIIDTANAFIAGFNLRLMLIFHGMSQLEDPKLYGRHGAETLAINCKMRSLFAPRTLKD
SEEYSKMLGTFTHLSRSRSRSRGRSASTSTNETEHGRPLMLPQELRALSSRKQIITIDGC
EPILCDKAYFYEDAELVDRLVQQSPYLLGLMASLEKTNRRRAWFGFGPKFPNEEQMKHAA
FVARELSAPVPQIDVEQWWHSQNAARRAQVEPAAGAAETAGVRDVREHEIGVLCAGHFTN
CGSIRAALFRLMPYLSEVLPDGAASARADTASSQAALQTGSHSDSPAAPQPDQQPEQGVV
A
NT seq 1806 nt   +upstreamnt  +downstreamnt
atgtcccacacgtatccaccattcatcgtcggcaaattcaagggcgagtacctgaagtat
cgcggccaggacttcctcatgctcgccgccggcacacgctcgggcaaaggcgtctcgatg
gtgatcccgaatcttctcacctatcccgattcggtcgtcgtcgaggacatcaaggaagag
aacttcatgtacacgtccggctaccgcaggaagtgcggccacgaggtctacctgtggtca
ccgttttccgaaaatggccgctcgcacgcatacaacccgctcgagtacatcgctggccga
ccggcctatacgcgcgtgggtgacgtgatgacgatcggcgagcatctgtatccgtcgaat
gtcgacgcgcgcctgaggtactggaatgacaacgcccgcaacctgttcattgggatcgtg
ctgtacctccttgaaacgccgtcgctgccgtgcacgttcggcgaagtgttgcggcaggcc
tccggcaagggccgcgcgattcgcgagcatgtctcgtcgatcgtcagtacgcgcgcgaat
gccaccgacacgctgcctgccctgagcttcgagtgtctggacgcgctcaaccgctttctg
tcgcagtcgagggaagcgtttgccaatattgtgtcgacgatgacggcgccgctaaacgtg
ttcagcaatcccgtcgtcgatgcggcgacgagccgttctgattttcatctgggcgaggta
cgaaagaagcgcatatccatctatgttggtatcaagccgggagacctgaaggcgggcgcg
ctgctcgtcaatctcttcttctcacagctgatcgacctgaacacgcgtgagcagcctgcc
gagaatccggagctcaagtaccagtgcgcgctgatgatggatgagtttgcggcaccggga
aagatcgacatcatcgatacggccaacgcgttcatcgccggcttcaacctgcggctcatg
ctgattttccacggcatgtcgcagctcgaggatccgaagctgtacggcaggcacggtgcg
gaaacactggcgatcaactgcaagatgcgtagcctcttcgcgccgcgcacgctgaaggac
tcggaagagtattcgaagatgctgggcacgtttacgcatctgtcgcgctctcgcagccgc
agccgcggccgcagcgcgtccacgagtacgaacgagaccgagcacggccggccgctgatg
ctgccgcaggaactgcgagccctgtccagccgcaagcagatcatcacgatcgacggttgc
gaaccgatcctgtgcgacaaggcgtacttctacgaggatgccgagctcgtcgaccgcctg
gtccagcagagtccctacctgctggggctgatggccagtctcgaaaagacgaaccgtcgc
cgtgcatggttcgggttcggaccgaagttcccgaacgaggagcagatgaagcacgccgcg
tttgttgcgcgcgaactcagtgcgcccgtgccgcagattgatgtcgagcagtggtggcac
tcgcagaatgccgcgcgtcgcgcccaggttgagcctgcagcgggcgcggcagagacagcc
ggggtgcgcgatgtccgcgaacatgaaattggcgtgctctgcgccgggcacttcaccaac
tgcggcagtatccgcgccgcgctgttccggctgatgccgtacctgagcgaggtgctgccc
gatggggccgcttcggcacgggcggacacagccagttcacaagccgcgttgcagaccggt
tcgcactccgattcgccagccgccccgcaacctgatcagcagcctgaacaaggagttgtc
gcatga

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