Paraburkholderia phytofirmans PsJN: Bphyt_2461 Help Entry Bphyt_2461        CDS       T00765                                  Name (GenBank) DNA ligase, NAD-dependent   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism bpy  Paraburkholderia phytofirmans PsJN Pathway bpy03030   DNA replication bpy03410   Base excision repair bpy03420   Nucleotide excision repair bpy03430   Mismatch repair Brite KEGG Orthology (KO) [BR:bpy00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     Bphyt_2461    03410 Base excision repair     Bphyt_2461    03420 Nucleotide excision repair     Bphyt_2461    03430 Mismatch repair     Bphyt_2461  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:bpy03032]     Bphyt_2461    03400 DNA repair and recombination proteins [BR:bpy03400]     Bphyt_2461 Enzymes [BR:bpy01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      Bphyt_2461 DNA replication proteins [BR:bpy03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      Bphyt_2461 DNA repair and recombination proteins [BR:bpy03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      Bphyt_2461    NER (nucleotide excision repair)     GGR (global genome repair) factors      Bphyt_2461    MMR (mismatch excision repair)     DNA ligase      Bphyt_2461   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       Bphyt_2461 SSDB OrthologParalogGFIT Motif Pfam:  DNA_ligase_aden OB_DNA_ligase Nlig-Ia HHH_2 BRCT HHH_5 DNA_ligase_ZBD PTCB-BRCT HHH MctB 5_3_exonuc Hint DUF4796_N BRCT_2 Motif Other DBs NCBI-ProteinID:  ACD16857 UniProt:  B2T5K0 LinkDB All DBs Position 1:complement(2773742..2775808) Genome browser AA seq 688 aa AA seqDB search MARTSASHPATSAPAERAAWLRAELERANYAYYVLDQPDLPDAEYDKLFKELESIETEHP DLIVPDSPTQRVGGEAASGFEPVVHDQPMLSLNNGFADEDIVAFDKRVGDALGKNASEPP VPVDYAAELKFDGLAISLRYVDGAFVQASTRGDGTTGENVTENVRTIRSIPLKLKGKRVP HVLDVRGEVLMFKRDFERLNERQRAAEQKEFANPRNAAAGSLRQLDSKITAQRPLSFFAY GIGVLEGMEMPATHSELLDWYKELGLPVNSERAVVQGAEGLLGFFHGVGEKREKLPYDID GVVYKVNRRDEQDALGFVSRAPRFALAHKFPAQEALTKLVAIDVQVGRTGAITPVARLEP VFVGGATVTNATLHNEDEVRRKDIRIGDTVIVRRAGDVIPEVVSALLDRRPSDAREFVMP TQCPVCGSSIERLPDEAIARCTGGLFCPAQRKQALWHFAQRRALDIDGLGEKIIDQLVEQ NLVRTPADLFNIGFATLAELDRFAEKSAQNLLDSLEKAKHTTLARFIYALGIRHVGESTA KDLAKHFGSLDPIMDASVEALLEVNDVGPVVAESIHQFFAEEHNRTVIEQLRAPGKVTWP EGPPAPKAPQGVLAGKTVVLTGTLPSLAREEAKEMLEAAGAKVAGSVSKKTDYLVAGADA GSKLAKAEELGVPVLDEDGMRKLLEGQL NT seq 2067 nt NT seq  +upstreamnt  +downstreamnt atggcccgaacctccgcctcacatcccgcaaccagcgccccggcagagcgagccgcgtgg ctgcgcgcggaactcgaacgcgccaactacgcgtactacgtgctcgaccagccggacctg cccgacgcggaatacgacaagctgttcaaggagctggaaagtatcgagacggagcatccg gatctgatcgtgccggattcgcccacccagcgcgtgggcggcgaggcggcgagcggcttc gagccggtcgtgcacgaccagcccatgctgtcgctgaacaacggtttcgccgacgaagac atcgtcgcgttcgacaaacgcgtcggcgacgcgctcggcaagaacgcgagcgagccgccg gtgccggtcgactacgcggcggaactgaaattcgacggcctcgccatctcgctgcgttac gtcgacggcgcgttcgtgcaagcctccacgcgcggcgacggcacgactggcgagaacgtc accgaaaatgtccgcacgattcgctccattccgctcaagctcaagggcaaacgcgtgccg cacgtgctcgacgtgcgcggcgaagtgctgatgttcaagcgcgatttcgagcgtctgaac gagcgtcaacgggctgcggaacagaaggaattcgctaatccgcgcaacgccgcggcgggc agtttgcggcagctcgattcgaagatcaccgcgcagcggccactgtcgtttttcgcttat ggcattggcgtgctcgaaggcatggagatgcccgccacgcatagcgaactgctcgactgg tacaaggaactcggcttgccggtgaatagcgagcgagcagtggtgcagggcgccgagggc ttgctgggctttttccacggcgtcggcgagaaacgcgagaagctgccgtacgacatcgac ggcgtggtctacaaggtcaaccggcgcgatgagcaggatgcgcttggcttcgtgtcgcgc gcgccgcgcttcgcgttggcgcacaaattccccgcgcaggaggcgctgaccaaactcgtc gcgatcgacgtgcaagtcggccggaccggcgcgatcacgccggtagcgcggctggagccg gtgttcgtcggcggcgcgacggtcacgaatgccacgctgcacaacgaagacgaagtgcgc cgcaaggatatccgcatcggcgacacggtgatcgttcggcgcgccggtgacgtgataccc gaagtggtgagcgcgctgctcgatcgtcgtccttccgacgcacgcgaattcgtgatgccc acgcagtgtccggtgtgcggttcgagcattgagcgcctgccggacgaggcgatcgcgcgt tgtaccggcggcctgttttgccccgcgcagcgcaagcaggcgctctggcatttcgcgcag cggcgcgcgctggatatcgacggcctcggcgagaaaatcatcgatcaactggtcgaacag aacctcgtgcgcacgccggccgatctgttcaatatcggttttgcgacgcttgccgaactc gaccgctttgccgaaaagtccgcgcaaaatctgctcgactcgctcgaaaaggccaagcac accacgttggcgcgcttcatctacgcgctcggcatccggcatgtgggcgaatccacggcg aaagatctcgccaagcacttcggctcgctcgatccgatcatggacgcctcggtcgaagcc ttgctggaagtcaacgacgtagggccggtggtcgcggaatcgatccatcagttcttcgcc gaggagcacaaccgcacggtgatcgagcagttgcgcgcgccgggcaaagtcacgtggccc gaaggcccgcccgcgccgaaggcgccgcaaggcgtgctggccggcaagacggtcgtactg accggcaccttgccgagcctggcccgcgaagaggcgaaggaaatgctggaagcggccggc gcgaaagtggccggctccgtatcgaagaaaacggactatctggtggcgggcgccgacgcg ggcagcaagttggcgaaggctgaggaactcggcgttcccgtactcgacgaagatggtatg cgtaagctcctggaggggcagttatga

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