Bombus pyrosoma: 122574431
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Entry
122574431 CDS
T07776
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
bpyo
Bombus pyrosoma
Pathway
bpyo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
bpyo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122574431
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
bpyo03041
]
122574431
Spliceosome [BR:
bpyo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
122574431
Complex C
U5 SnRNP specific factors
122574431
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Roc
Ras
Motif
Other DBs
NCBI-GeneID:
122574431
NCBI-ProteinID:
XP_043597975
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All DBs
Position
LG13:7816762..7821516
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AA seq
980 aa
AA seq
DB search
MDADLYDEFGNYIGPDLASDSEDENEYGNAGDDAEDRERSDEEMEEDRDEVREQSEQGNS
MAVVLHEDKRYYPSALEVYGPEVETLVQEEDAQPLDKPLIAPTRKPKFQIKQQQLPETTY
SIEFLADMMDAPHLIRNVVLLGHLHHGKTTLVDCLVRQTHPYLHSVTDEKPLRYTDTLFT
EQQRGVSTKATPVTLLLQDVKSKSYLLNIFDTPGHVNFSDEATAAIRLSDGAVLIVDAAE
GVMLNTERLLKHALQEKLALTVCINKIDRLILELKLPPLDAYYKLRHIIEEINGLIALYS
DSENPSFVSPAIGNVCFASSEYNVCFTLKSFAALYAKIHPSLNANEFSKRLWGDIYFNSK
TRKFTKKPPHNTAQRSFIEFILEPLYKIFAQVVGDVDTTLPDVLDELGIRLTSEEMKMNI
RPLLRLVCTRFLGDMCGLVDMCVAHVPSPQSHAPVKVQHVYTGSMDSSLAQDMINCDPDG
RLMIHSTKMYPTEDCTLFVVLGRVMSGTLEAGQRVRVLGEAYSRTDEEDSRVLTVGRLWI
SEARYSIELNRVPAGNWVLIEGIDRPIVKTSTITDLSNSDDLHIFRPLKFNTQSVIKIAV
EPVNPSELPKMLDGLRKVNKSYPLLGTRVEESGEHVVLGTGELYLDCAMHDLRRMYSEID
IKVADPVVAFAETVVETSSLKCFAETPNKRNKLTMIAEPLERGLAEDIEAEHVKITWNKK
RLGEFFQTKYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKTLLNSARDAIIQGFQW
GTREGPLCEEPIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVAYSAFLMATPRLMEPYL
FVEVQAPADCVSAVYTVLAKRRGHVTQDAPVPGSPLYTIKAFIPAIDSFGFETDLRTHTQ
GQAFCLSVFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMLKTRRRKGLSEDVSINKF
FDDPMLLELARQDVLLNYPL
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggatgcagatctatacgatgaatttggcaattatattggtcccgatttggcttctgat
agcgaagatgaaaatgaatatggaaatgccggagacgatgcagaagacagggagcgctct
gatgaggaaatggaagaagacagagatgaagttagagaacaatcggagcaaggaaattcc
atggcagttgtattgcacgaggataaaagatattatccaagtgctttagaagtttatggg
ccagaggtagagacattggtacaagaagaagacgcacagccattagataaaccgctgata
gcaccaacacgaaaaccaaagtttcaaataaaacaacagcaactaccagagacaacgtat
agcatagaatttttagcagatatgatggatgcacctcaccttatacgtaatgttgttcta
cttggtcacctacatcacggcaaaactactttagtcgattgtctagtgagacagacgcat
ccctatcttcacagcgtaacagacgaaaaacctttaaggtataccgacacattattcacc
gagcaacagcgaggagtatcgacgaaagcaacacccgtgacgttgttactgcaagacgta
aaatcaaagtcctaccttttaaatatattcgatactccgggtcacgtaaatttttctgac
gaggcgacagcggcgatacgtttatccgatggagcggtgctgatcgtcgacgccgccgaa
ggcgtcatgttgaacacagaacgtttactaaaacacgcgcttcaggaaaaacttgcgtta
acagtttgtataaataagatagaccgactgatcctcgaactaaaattgccccccttagac
gcgtactataaattaagacatatcatcgaagaaattaatgggctgatagcgctatattcg
gattctgaaaatccatctttcgtgtcacctgcaatcggaaacgtgtgctttgcgagctcg
gagtacaatgtctgtttcaccctgaaatccttcgcggccctttacgctaagatccatccc
tcgcttaacgccaatgaattttcgaaacgactatggggagatatatactttaactcgaaa
acacggaaatttacgaaaaaaccgccacacaataccgcacagcgcagctttatcgaattc
attctcgagccattgtacaagatcttcgcgcaagttgtcggcgatgttgacacaacttta
cccgatgtactggacgaattaggcataagactaacatccgaagaaatgaaaatgaatatt
agacctctgttgagattggtatgcacgcgtttcttgggagacatgtgcggattagtcgat
atgtgcgtagcccacgttcctagtcctcagtcgcacgcaccagtcaaagttcaacacgtg
tacacaggctctatggattcgtctctcgcgcaggatatgatcaattgcgatcctgacggc
aggctaatgattcacagcacaaaaatgtatcctaccgaggactgtactctattcgtggtc
ctcggaagggtaatgtcaggtacactcgaggcaggacaacgtgtccgcgtattaggtgaa
gcatactcgcgtaccgacgaagaagattctcgcgttttaaccgtgggaaggttgtggatt
agcgaggcacgctactcgatcgagctgaacagagttcccgcgggcaactgggtacttatc
gaaggtatagacaggccgatcgtaaaaacgagcaccattaccgatctcagtaattcagac
gacttgcatatcttccgaccattgaagttcaatactcagagcgtgatcaaaatcgcggtc
gaacctgtcaatccatcagagttaccaaaaatgttagacggcctgaggaaagtgaataaa
agctatccattgctgggcacgcgagtcgaggagagcggcgaacacgtggtcctaggtacc
ggtgaattgtacttggactgcgcgatgcacgacctgcgtcgtatgtattcggaaatcgat
ataaaagtagcagacccggtcgttgctttcgcggagacggtagtagaaacgagttctctc
aagtgtttcgccgaaacacccaataaacggaacaagttgacgatgatcgccgaaccactc
gagagaggcctggctgaggacatcgaggcggaacacgttaaaatcacgtggaacaaaaaa
cgtctaggagaatttttccagacgaagtacgactgggatttattggcggcgcgaagcata
tgggcgtttggtccagacgccacgggtcctaatattctggtcgacgatactttgccatca
gaagtagacaagacgctattgaacagcgcccgtgacgccatcattcagggcttccagtgg
ggtacgcgagaaggtcctctctgcgaagaaccgattagaaacgtgaagttcaaaatcctg
gacgccgtgattgctcaagaacctcttcatcgaggaggtggtcagataattccgacggcc
agaagggtagcctattctgccttccttatggcaacgcccagattgatggaaccctacttg
ttcgtcgaagttcaagcgcctgcggattgcgtgtcagcggtttataccgtgctggctaaa
agaaggggccacgtgactcaagacgctcccgttcccggaagtcccttgtataccatcaaa
gcattcatcccggcaatcgatagtttcggattcgagactgacctgcgaacccatacgcaa
ggtcaggctttctgcctgtccgtattccatcattggcagatcgtgcctggcgatccatta
gataaaagcattactattcgaccactggagccacagccagctacgcatttagctagagag
tttatgttgaagacaagaaggcgaaagggactttcggaagacgtgtctatcaataaattc
ttcgacgatcctatgttattggaattagcccgacaggacgttctattgaattacccgtta
taa
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