Burkholderia pyrrocinia: ABD05_22855
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Entry
ABD05_22855 CDS
T03962
Name
(GenBank) RND transporter
KO
K18903
outer membrane protein, multidrug efflux system
Organism
bpyr
Burkholderia pyrrocinia
Module
bpyr_M00698
Multidrug resistance, efflux pump BpeEF-OprC
Brite
KEGG Orthology (KO) [BR:
bpyr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bpyr02000
]
ABD05_22855
01504 Antimicrobial resistance genes [BR:
bpyr01504
]
ABD05_22855
Transporters [BR:
bpyr02000
]
Other transporters
Pores ion channels [TC:
1
]
ABD05_22855
Antimicrobial resistance genes [BR:
bpyr01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
ABD05_22855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
PDCD10_N
CSN7a_helixI
Motif
Other DBs
NCBI-ProteinID:
AKM03012
LinkDB
All DBs
Position
2:1472887..1474422
Genome browser
AA seq
511 aa
AA seq
DB search
MDNMHNTNGLMRFAKVAAASTLLATLLAACAVGPDYKRPDVSTPAAFKEAPTLAAGEQAG
TWKTAEPSDGAHRGEWWTVFGDPVLDSLETQALAANQNLKAAAARVEEARAATRTARSQW
FPQIGAGFGPTREGLSSASQFQPQGTGPTNATLWRAQGTVSYEADLFGRVGRNVEASRAD
QAQSEALFRSVQLALQADVAQNYFELRQLDSDQDLYRRTVELRDQALKLVQRRFNEGDIS
ELDVSRAKNELATAQADAVGVARRRAASEHALAILLGKAPADFAFKETPIVPVGVKIPAG
LPSALLERRPDVSAAERAMAAANARIGLAKSAYFPKLDITGAFGYEASTLGNLFLWSSRT
FLLGPFAGTALTLPLFDGGRRAAGVQQARAQYDEQVANYRQQVLVAFREVEDNLADLRLL
DDQIRAQDAAVNASRRAATLSRTQYQEGEVAYLDVIDSERSVLLSQLQANQLTGAQAVST
VNLIRALGGGWGNAPTAVGDAASVKAEVAAR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggacaacatgcacaacacgaatggcctgatgcgcttcgcgaaggtggcggccgcgagc
accctgctcgcgacgctgctcgccgcgtgcgcggtgggccccgactacaagcgcccggat
gtgtcgacgcccgccgcgttcaaggaagcgccgacgctcgccgcgggcgaacaggccggt
acgtggaagacggccgagccgtcggacggcgcgcatcgcggcgaatggtggacggtgttc
ggcgatccggtgctcgattcgctcgagacgcaggcgctcgccgcgaaccagaacctgaag
gccgcggccgcgcgtgtcgaggaagcgcgcgcggcgacacgtactgcgcgctcgcaatgg
ttcccgcagatcggcgccggtttcgggccgacgcgcgaagggctgtcgtcggcgtcgcag
ttccagccgcaaggcacgggcccgaccaacgcgacgctgtggcgcgcgcagggcacggtg
tcgtacgaggccgacctgttcggccgtgtcggccgcaacgtcgaggcgtcgcgcgccgac
caggcgcagagcgaagcgctgttccgttcggtgcagctcgcgctgcaggcggacgtcgcg
cagaactacttcgaactgcgccagctcgactcggaccaggacctgtaccgccgcacggtg
gaactgcgcgaccaggcgctgaagctcgtgcagcgtcgcttcaacgaaggcgacatcagc
gagctcgacgtgtcgcgggcgaagaacgagctggccactgcgcaggccgatgcggtcggc
gttgcgcgccggcgcgcggcctccgagcatgcgctcgcgatcctgctcggcaaggcgccc
gcggatttcgcgttcaaggaaacgccgatcgtgccggtcggcgtgaagattccggcgggc
ctgccgtccgcgctgctcgagcgccgtccggacgtgtcggcggccgagcgcgcgatggcg
gccgcgaacgcgcggatcggcctcgcgaagtcggcgtatttcccgaagctcgatatcacg
ggcgcgttcggttatgaggcgtcgacgctcggcaacctgttcctgtggtcgagccgcacg
ttcctgctcgggccgttcgccggcaccgcgctgacgctgccgttgttcgacggcgggcgc
cgtgcggccggcgtgcagcaggcgcgtgcgcagtacgacgagcaggtcgcgaactaccgg
cagcaggtgctcgtcgcgttccgcgaggtcgaggacaatctcgccgatctgcgcctgctc
gacgaccagatccgcgcgcaggatgcggccgtcaatgcgtcgcgccgcgcggcgacgctg
tcgcgcacgcagtatcaggagggtgaggtcgcctatctcgacgtgatcgacagcgagcgg
tcggtgctgttgtcgcagttgcaggcgaaccagttgaccggcgcgcaggccgtgtcgacc
gtgaacctgatccgtgcgttgggcggcgggtggggtaatgcgccgacggcggtcggcgat
gcggcgtccgtcaaggcggaagtcgccgcgcgttga
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