Bradyrhizobium sp. Ash2021: NL528_16450
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Entry
NL528_16450 CDS
T11004
Symbol
shc
Name
(GenBank) squalene--hopene cyclase
KO
K06045
squalene-hopene/tetraprenyl-beta-curcumene cyclase [EC:
5.4.99.17
4.2.1.129
]
Organism
braa Bradyrhizobium sp. Ash2021
Pathway
braa00909
Sesquiterpenoid and triterpenoid biosynthesis
braa01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
braa00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
NL528_16450 (shc)
Enzymes [BR:
braa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.129 squalene---hopanol cyclase
NL528_16450 (shc)
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.17 squalene---hopene cyclase
NL528_16450 (shc)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SQHop_cyclase_C
SQHop_cyclase_N
Pec_lyase
Prenyltrans
TED_complement
Motif
Other DBs
NCBI-ProteinID:
WMT77842
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Position
3478362..3480320
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AA seq
652 aa
AA seq
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MLSGHHTAAVDQATLEKSISQATQALLGYRQSDGHWVFELEPDSTIPAEYVLLRHYLGEP
VDSVLEAKIANYLRRVQGDHGGWPLVQDGAFDMSASVKCYFALKMIGDSVDAPHMVRARQ
AILSRGGGIHSNVFTRFMLAMFEVLTWRSVPVLPIEIMLLPMWSPFHINKISYWARTTMV
PLMVLAALKPRAKNPKGVGIDELFLQDPRSIGMTAKAPHQSWGWFALFRALDIVLRFLEP
MFPKKLRARAIERAVEFIEVRLNGEDGLGAIYPPMANAVMMYEAFGRPADYPPRAVTRRG
LDKLLVIREHEAYCQPCVSPVWDTALACHAMIEAGGEAMLPAKQGLDWLKPKQVLDLKGD
WAVKRPDVRPGGWAFQYNNDYYPDLDDTAVVVMAMDRVRRQSGSGEYDVAIARGREWIEG
MQSRNGGWAAFDVDNLEYYLNNIPFSDHGALLDPPTEDVTARCLSMLAQLGETAQTSKAV
ADGVAYLRRTQLAEGSWYGRWGLNYVYGTWSVLCALNAAGIDHQDPMTRKAVDWLISIQN
RDGGWGEDAVSYRLDYKGFEGAPSTSSQTAWALLGLMAAGEVENPAVARGVEYLKSTQTE
KGLWDEARYTATGFPRVFYLRYHGYSKFFPLWALARYRNLSSTNNRVVGVGM
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgctttccggccatcacaccgctgcagtcgatcaagccacgctggagaagagcatctcc
caggcgacgcaggcgctgctcggctatcgccaatccgacgggcactgggtgttcgagctt
gaacccgacagcacgatcccggcggaatatgtgctgctgcgccactatctcggcgagccc
gtcgacagcgtgctggaggccaagatcgcgaactatctgcgccgcgtccagggcgatcat
ggcggctggccgctggtgcaggacggcgcgttcgacatgagcgccagcgtcaaatgctat
tttgcactgaagatgatcggcgattccgtcgacgcgccgcatatggtgcgggcgcgccag
gcgatcctgtcgcgcggcggcggcatccacagcaacgttttcacccggttcatgctggcg
atgttcgaggtgctgacctggcgcagcgtgccggtgctgccgatcgagatcatgctgctg
ccgatgtggtcgccgttccacatcaacaagatctcgtactgggcgcgcaccacgatggtg
ccgctgatggtgctggcggcgctgaagccgcgcgcgaaaaacccgaaaggcgtcggcatc
gacgagttgttcctgcaggatccgcgttcgatcggcatgaccgccaaggcgccgcatcaa
agctggggctggttcgcgctgttccgcgcgctggacatcgtgctgcggtttctcgaaccg
atgtttcccaagaagctccgcgcgagggcgatcgagcgcgccgttgagtttatcgaagtg
cggctgaacggcgaagacgggctcggcgcgatctatccgccgatggccaacgccgtgatg
atgtatgaggcgttcggcaggcccgcggattatccaccgcgcgccgtcacaaggcggggt
ctcgacaagctgctcgtgatccgcgagcacgaagcctattgccagccctgcgtttcgccg
gtgtgggacaccgcgctcgcctgccacgcgatgatcgaagccgggggtgaggcgatgctg
ccggccaagcagggcctggattggctgaagccgaagcaggtgctggacctcaagggcgac
tgggccgtgaaacgccccgacgtgcggccgggcggttgggcgttccagtacaacaatgac
tattatcccgatctcgacgacaccgccgtggtggtgatggcgatggatcgcgtacggcgg
caatccggcagcggcgaatacgacgttgcgatcgcgcgcggccgcgagtggatcgagggc
atgcagagccgcaacggcggctgggccgccttcgacgtggacaacctcgaatactacctc
aacaacatcccgttctccgaccatggcgcgctgctcgatccgccgaccgaggacgtcacc
gctcgctgcctctcgatgctggcgcaactcggcgagaccgcccagaccagcaaggcggtg
gcggacggggtcgcctatctgcgccggacccagttggcggagggatcgtggtacggccgc
tgggggctgaactacgtctatggaacctggtcggtgctgtgcgcgctcaatgccgccgga
atcgaccaccaggacccgatgacgcgcaaggcggtggactggctgatttcgatccagaac
cgggatggcggctggggcgaggatgcggtcagctaccgactcgactacaagggatttgag
ggcgcgccgtcgacctcctcgcaaacggcatgggccttgcttggactgatggcggcgggc
gaggtcgaaaacccggctgtcgcccgtggcgtggagtacctaaaaagcacacagaccgaa
aaagggctgtgggacgaggcgcgctacacggcaacgggctttccgagggtgttttacttg
cgttatcatggctactcgaagttctttccgctctgggcgctggcgcggtatcgaaatttg
agcagcaccaacaacagggtggtaggggtcgggatgtga
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