Bradyrhizobium sp. 62B: ML401_26955
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Entry
ML401_26955 CDS
T10244
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
bray Bradyrhizobium sp. 62B
Pathway
bray00300
Lysine biosynthesis
bray00550
Peptidoglycan biosynthesis
bray01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
bray00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ML401_26955
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ML401_26955
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
bray01011
]
ML401_26955
Enzymes [BR:
bray01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
ML401_26955
Peptidoglycan biosynthesis and degradation proteins [BR:
bray01011
]
Precursor biosynthesis
Amino acid ligase
ML401_26955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Motif
Other DBs
NCBI-ProteinID:
WIW45067
LinkDB
All DBs
Position
complement(5849741..5851213)
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AA seq
490 aa
AA seq
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MKLRDLLGLDILGNDAAIEPAIAALDVTGLALDSRVVKPGDLFFALAGSKTDGARFVDAA
IAAGAVAVVGDHAPDGGKVPFIAVANPRRALALAAASFFPAQPATIAAVTGTSGKTSVAA
FTRQIWERLGHVSASIGTIGLVSPKRTVYGSLTTPDPIALHRQIDEIAREGVTHLAFEAS
SHGLDQFRLDGVRVSAGGFTNLSRDHMDYHPTVAHYLAAKLRLFRELVPPGGAAVISADH
DCSAEAIDAAKTRGLRVMAVGRNGDGAGEGIRLADARVEGFSQVLALEHRGKRYAIRLPL
VGEFQIENSLVSAGLAIGTGSDAANVLASLEHLEGAKGRLELVGERNGAPIFVDYAHKPD
ALVKALQALRPYARRRLVVVFGAGGDRDAGKRPIMGEIAAENADGIIITDDNPRSEKPEA
IRAAILATARGAREIGDRAAAIRAAIEELQEGDALLIAGKGHETGQIVGGEVLPFSDHEA
VAAALASRVA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcgcgacctcctgggtctggatattctgggcaatgacgccgcgatcgagccc
gccatcgccgcgctcgatgtgaccggccttgcgctcgacagccgcgtcgtcaagccgggt
gatctcttcttcgcgctggcgggcagcaagaccgatggcgcgcgcttcgtcgacgccgcg
attgccgcgggcgcggtcgccgtcgtcggcgaccatgcgcctgatggcggcaaggtgccg
ttcatcgccgtcgccaatccgcgccgtgcgctggcgctggccgccgcaagcttcttcccc
gcccagccggcgaccatcgcggccgtgaccggcaccagcggcaagacctcggttgcagcc
ttcacgcgccagatctgggagcggctggggcatgtctccgccagcatcggcaccatcggt
ctcgtctcgcccaagcgcacggtctatggctcgctgacgacgccggatccgatcgcactg
caccggcagatcgatgagatcgcgcgcgagggcgtcacccatctcgccttcgaggcgtcg
tcgcacgggctcgatcaattcaggctcgacggcgtgcgtgtctccgccggcggcttcacc
aatctctcgcgcgaccatatggattatcatccgaccgtcgcgcattaccttgccgcgaaa
ctccgcctgttccgcgagctggtgccgcccggcggcgcggcggtgatctcggccgatcat
gattgctcggcggaagcgatcgacgctgcgaagacgcgcggcctgcgcgtcatggcggtc
ggtcgcaacggcgacggggcaggcgagggcattcgtctcgcggacgccagggtcgaaggc
ttctcgcaagtgctcgcgctcgagcatcgcggcaagcgctatgcgatccgcctgccgctg
gtcggggaattccagatcgagaactcgctggtgtcggcgggtcttgccatcgggaccggc
agcgatgcggccaacgtgcttgcaagccttgagcatctcgaaggcgccaagggacgactc
gagctcgtcggcgagcgcaatggcgcgccgatcttcgtcgactacgcgcacaagcccgat
gcgctcgtgaaggcactgcaggcgctgcgtccctatgccaggcgcaggctggtcgtcgtg
ttcggcgccggcggcgaccgcgatgccggcaagcgtccgatcatgggcgagatcgcagcc
gagaacgctgacggaatcatcatcaccgacgacaatccgcgcagcgagaagccggaagcg
atccgcgccgcgatcctcgctaccgccaggggcgcccgcgaaatcggcgaccgtgccgct
gccatccgcgccgcgatcgaggaattgcaggagggcgatgcgctgctcatcgccggcaag
ggccacgagaccgggcagatcgtcggcggagaggttttgcccttcagtgatcacgaggcg
gtcgccgccgcattagcgtcgagggttgcatga
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