Borrelia recurrentis: BRE_557
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Entry
BRE_557 CDS
T00769
Symbol
lig
Name
(GenBank) DNA ligase
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
bre
Borrelia recurrentis
Pathway
bre03030
DNA replication
bre03410
Base excision repair
bre03420
Nucleotide excision repair
bre03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bre00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BRE_557 (lig)
03410 Base excision repair
BRE_557 (lig)
03420 Nucleotide excision repair
BRE_557 (lig)
03430 Mismatch repair
BRE_557 (lig)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bre03032
]
BRE_557 (lig)
03400 DNA repair and recombination proteins [BR:
bre03400
]
BRE_557 (lig)
Enzymes [BR:
bre01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
BRE_557 (lig)
DNA replication proteins [BR:
bre03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BRE_557 (lig)
DNA repair and recombination proteins [BR:
bre03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
BRE_557 (lig)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BRE_557 (lig)
MMR (mismatch excision repair)
DNA ligase
BRE_557 (lig)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BRE_557 (lig)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
DNA_ligase_OB
BRCT
HHH_5
PTCB-BRCT
DNA_ligase_ZBD
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ACH94786
UniProt:
B5RPQ2
LinkDB
All DBs
Position
584100..586109
Genome browser
AA seq
669 aa
AA seq
DB search
MGKDIKDEILSLRDAIKKWDREYYVDSSPTVGDVTYDKALLRLQYLENRYPEYKTLDSPT
LKFGSDLLNDFKEIEHSYPILSLDKAYDVKELLLWVEKMSLEGSNLGFDMGISAEPKIDG
CSIVLYYKDGILEKALTRGDGRFGNNVIENVRTIKNVPLCIGERVELVLRGEIYITKKDF
LKINHTLDDSYINARNLTSGILRRINSREVVNFPLDIFVYDILYSSLKLNTNHDAFDKLK
HFGFKLNPFCKFFCGKNLGENIINYVKEIEEQRERFEYEIDGVVLKVNDFRLRDVLGYTS
HHPKWSIAYKFESLRAVSKVIDIVVQVGRSGKITPVANIEKVLIAGAFITSASLHNQDYI
DSIGLNVKDVVAISRRGDVIPAVELVVEKLSVGNFKIPNYCPSCKKSLIKEGAHLFCVNI
HCPLKIMGHIKYFCSKKCMNIVGLSEKTIEFLFNMNFISSEIDLYTFDFDRLIGLKGFNF
KRVNKLKRSIEESKNRPFKKLLLAMGIKDLGINTILLLINNNLNSFDAISLLCQDNKNAL
VKLLDIKGIGERIAFNIIRAFNDKIILDKFNFFKKLGFKMQEDSMNCVIDSSFLFGKKFC
ITGSFDEYSRHVLIDKITKKGAIFHSAVSRYLDFLLVGKSPGLKLKKANNLGIKILSLFD
IKNLVNLDD
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagatataaaagatgaaattttatctttaagggatgccattaaaaaatgggat
agggaatattatgttgattcgtcacctactgtgggcgatgttacctatgataaagctctt
ttgagacttcaatatttggagaataggtatcctgaatataaaactttagattctcctacg
cttaaatttggaagtgatcttttaaatgattttaaagagattgaacattcttatcctata
ttgagtttagataaggcctatgatgttaaagaattattattatgggttgagaaaatgagt
ttagaaggttctaatttgggatttgatatgggaatttcagctgaacctaaaatagatgga
tgttcaattgttctttattataaagatggaatacttgagaaagctttaaccaggggcgat
ggtagatttggtaataatgtgattgaaaatgtgagaacaattaagaatgttcctctatgc
attggagaacgggttgaattggtattgagaggtgaaatttatattaccaaaaaagatttt
ttgaaaataaatcatacattagatgattcttatattaatgctagaaatttgacttcaggt
atattgagaagaataaatagtagagaagttgttaactttcccttagatatttttgtttat
gatattttatattccagtttgaaattaaatactaatcatgatgcttttgataagcttaaa
cattttggttttaaacttaatcctttttgtaagtttttttgtggtaaaaacttgggagaa
aatattattaattatgtaaaggaaatagaagaacagagagagcgttttgaatatgagatt
gatggtgttgttttaaaggttaatgattttcgtttacgagatgttttgggatatacttct
catcatcctaaatggtcaattgcttataagtttgagtctttgagagctgttagtaaggta
attgatatagttgttcaggttggacgtagtggtaaaattactcctgttgcaaatatagag
aaagtacttattgcaggagcttttattaccagtgcaagtttacataatcaggattacata
gattctattggtttaaatgttaaagatgttgttgcaatttcaaggcgtggagatgtaatt
cctgccgttgaattggttgtagaaaaactttctgttggtaattttaaaattccaaattat
tgtccttcatgtaaaaagtctttaataaaagagggtgcacatcttttttgtgttaatata
cattgtcctttgaagattatgggacatataaagtatttttgtagtaaaaaatgtatgaat
attgtgggactttcagaaaaaacaattgaatttctttttaatatgaattttatatcttca
gaaatagatctctatacatttgattttgataggcttattggtcttaagggatttaatttt
aaaagggtaaataagttaaagcgttctattgaagagagtaaaaatagaccgtttaaaaaa
ttacttcttgctatgggtattaaggatctgggcattaatacaatattattgttaatcaac
aataatttaaattcatttgatgcaattagtttgctttgtcaagataataaaaatgcactt
gttaaacttttagatattaaagggataggagaaagaatagctttcaatattattagagcc
tttaatgataagattatccttgataaatttaacttttttaagaaattaggatttaagatg
caagaagatagtatgaattgtgttatagattcttcttttttatttggtaaaaaattttgt
ataacaggatcttttgatgagtattccagacatgttcttattgataaaattactaaaaaa
ggtgctatttttcacagtgcagttagtagatatttagattttttacttgttgggaaaagt
cctggattaaaattaaaaaaagctaataatttgggcattaaaattcttagtctttttgat
attaaaaatttagtcaatttagatgattaa
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