Balearica regulorum gibbericeps (East African grey crowned-crane): 104633780
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Entry
104633780 CDS
T09009
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
breg
Balearica regulorum gibbericeps (East African grey crowned-crane)
Brite
KEGG Orthology (KO) [BR:
breg00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
breg04040
]
104633780 (SCN4A)
Ion channels [BR:
breg04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
104633780 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
IQ
GPHH
Motif
Other DBs
NCBI-GeneID:
104633780
NCBI-ProteinID:
XP_010298392
LinkDB
All DBs
Position
Unknown
AA seq
1840 aa
AA seq
DB search
MAGLPHIPGPENLRPFTPASLAAIEQRIAEAEALKVKRQQVELPEEEEIKPSSDLEAGKN
LPLIYGDPPLELIGTPLEDLDPFYKDKKTFIVLNKGKSIFRFSATPALYLLGPFHPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTLSNPPAWSKNVEYTFTGIYTFESLIKILSRGFCI
DNFTFLRDPWNWLDFMVISMAYITEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRWPPLNDTLLGDLGLDNDTLAN
TTLYGNFTDGIVSNFTSNSTSNNTFDFEAYINDEANFYFLEGALDALLCGNSSDAGKCPE
GYQCMKAGRNPNYGYTSYDTFSWAFLALFRLMTQDFWENLFQLTLRAAGKTYMIFFVVVI
FLGSFYLINLILAVVAMAYAEQNDATLLEEQQKEEEFQQLMEQLKKHQEEQEKMLQDQRS
SSGSLPSSAAEKERDSDLNSDQDKAKDCNGQVVPKVVLERSATVIEFNPTNKPEKSNHNH
LTVGKQDGPGLEKRVGSAVSVISNAVEELEEAHQKCPSWWYKFAHTFLVWNCCPLWLKLK
AFVKLVVMDPFVDLGITICIVLNTVFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLK
LIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNM
LIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYIECVCKISLDCTLPRWHMNDFF
HSFLIVFRILCGEWIETMWDCMEVAGQAMCLIVFMMVMVIGNLVVLNLFLALLLSSFSAD
SLAASDDDGEMNNLQIAIGRITKGIDFVKTSVLMLLHRLWKGKKVAPEEEQEPNKRDNSV
LNHVDTGQEPKSEYLDGVTGKEHYFMDELDHMNFINNPNLTVQVPIASEESDLYEETSTQ
SDTEDAKNPLSSDNASSLCSTVDYKPPLPVEEEVAEEAEDSNEPEECFTEACVKRFPCLY
VDITSDRGKVWWNIRKTCFRIVEHDWFETFIVFMILLSSGALAFEDIYIEQRKVIRTILE
YADKVFSYVFVIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIK
SLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKY
YRCINTTSGELFDISVVNNKSDCMALLYTNEVRWVNVKVNFDNVGLGYLSLLQVATFKGW
MDIMYAAVDSREIEEQPVYEINLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFG
GKDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPSNKFQGMVFDLVTKQVFDIIIMILICLN
MVTMMVETDDQSELKTSVLYKINLVFIVIFTGECVLKMFALRYYYFTIGWNIFDFVVVIL
SILGIVLSDIIEKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIG
LLLFLVMFIYSIFGMSNFAYVKKEAGIDDIFNFETFGNSMICLFQITTSAGWDGLLSPIL
NSGPPDCDPNLENPGSSVKGNCGNPSIGIFFFCSYIIISFLIVVNMYIAIILENFNVATE
ESSEPLCEDDFEMFYETWEKFDPDATQFIAYSTLSDFVDTLQEPLKIPKPNKIKLITMDL
PMVAGDKIHCLDILFALTKEVLGDSGEMDALKATMEEKFMAANPSKVSYEPITTTLKRKH
EEVCATKIQRAFRRYLLRRSVKQASYMYRHSKDEDSLREDAPEKEGLIATKMHEMFGNSG
TDVETAPAFGLAPVPSSETQDAPGKAKAWDKERVVKESLV
NT seq
5523 nt
NT seq
+upstream
nt +downstream
nt
atggccggcctgccgcacatcccgggccccgagaacctccgccccttcacccccgcctcg
ctggctgccatcgagcagcgcatcgccgaggcagaggcgctcaaggtaaagcggcagcaa
gtggagctgcctgaggaagaggagatcaagcccagcagtgacctggaagctggcaagaac
ctgcccctcatctatggtgacccaccgctggaactcatcgggacccccctggaggacctg
gaccctttctataaggacaagaagacattcatagtcctcaacaaagggaagtccatcttc
cgcttctcggcgacgcctgctctctacctgctggggcccttccaccccatccgcagagga
gccattaaagtgcttatccattctttattcagcatgttcatcatgatcacaattttaacc
aactgtgtgtttatgacgctgagcaaccccccagcgtggtccaagaacgtggaatacacc
ttcactgggatatacacctttgagtccctcatcaagatactgtcgagaggcttctgcatc
gacaacttcacattcctgcgcgacccgtggaattggctggacttcatggtcatctccatg
gcctatatcactgagttcgtggacctggggaacatctctgctctcaggaccttccgtgtc
ctccgtgccttgaaaaccatcacggtgataccagggctgaagacaatcgttggggctctg
atccagtcagtgaagaaactctcggatgtcatgatcctcactgtcttctgcctgagcgtg
ttcgccttaatcggtctccagctcttcatggggaacctccggcagaagtgtgtgcggtgg
ccccccctcaatgacaccctgctgggggacttggggctggacaatgacacgttggccaac
acaacactctacggcaacttcactgatggcattgtcagcaacttcaccagcaacagcacc
agcaacaacacctttgatttcgaggcctacatcaacgatgaagccaatttctactttctg
gagggagcgcttgacgccctgctctgcgggaacagcagcgatgctgggaagtgccctgaa
gggtaccagtgcatgaaggcagggaggaacccgaactacggctacaccagctacgatacc
ttcagctgggctttcctggccctcttccgcctcatgacacaggacttctgggaaaacctc
ttccagctgacactgcgtgcagcagggaaaacgtacatgatcttctttgtggtggttata
tttcttggttccttctacctcatcaacctcatcctcgctgtggtggccatggcttacgca
gaacaaaatgacgccacgttgctggaggagcagcagaaggaggaggaatttcagcagctc
atggagcagctgaagaaacatcaagaggagcaagagaagatgttgcaggaccagcggtcc
agcagcggttccctgcccagcagtgcggctgagaaggagcgtgactcggacctgaacagt
gaccaggacaaggcaaaggactgcaatgggcaagtggtccccaaggtcgtgctggagcgg
tctgctacggtgattgagttcaacccaaccaacaagccggagaaatcaaaccacaaccac
ctcactgtgggcaagcaagatgggccaggccttgagaagagagtggggagcgccgtcagt
gtcatctccaacgctgtggaagagctggaggaagctcaccagaagtgcccgtcctggtgg
tacaaatttgcccacacattcctggtctggaactgctgtcctctgtggctgaagctgaag
gcatttgtcaagctggtggtgatggaccccttcgtggacctgggcatcaccatctgcatt
gtgcttaacacagtcttcatggccatggagcattaccccatgacagaggagtttgagaac
gtgctgaccgtggggaacctggtctttacggggatcttcacagcagagatggtcctgaag
ctcattgctctggacccctacgagtatttccagcagggctggaacatctttgacagcatc
atcgtcaccctgagcctggtggagctgggcctggccaacgtacaagggctgtccgtgctc
cgctccttccgcttgctgagggttttcaagctcgccaagtcctggcccaccctcaacatg
ctcatcaagatcatcggtaactcggtgggcgcgctggggaacctcacactggtgttggcc
atcatcgtcttcatcttcgccgtggtggggatgcagctctttgggaagagctatatagag
tgcgtgtgcaagatctccctcgactgcacgctgccccgctggcacatgaatgacttcttc
cactccttcctcatcgtcttccgcatcctctgtggggagtggatcgagaccatgtgggac
tgcatggaggtggccggccaggccatgtgcctcatcgtcttcatgatggtcatggtcatt
gggaacctcgtggtgctgaacctgttcttggctttgctgctgagctccttcagcgccgat
agcctggcggcatctgacgacgacggagagatgaacaatttgcagattgctattggcagg
atcaccaaggggatcgactttgtaaagacctctgtcctcatgctgctccacaggctgtgg
aaggggaagaaggtggccccggaggaagagcaagagccaaataagagggacaactctgtg
ctaaaccatgtggacactggccaggagcccaagtcagagtacctggatggagtgactggc
aaagagcattatttcatggatgaactggaccacatgaatttcattaacaaccccaacctg
acggtgcaggtccccatcgcctcggaggagtctgacctctacgaggagacgagcacccag
tccgacactgaagatgccaagaatcccctctccagcgacaatgcgtcgtccctgtgcagc
accgtggattacaagcccccactgccggtggaggaggaggtggcggaagaggctgaagac
agcaatgagcccgaggagtgcttcactgaagcctgtgtgaagaggtttccctgcctctac
gtggacatcaccagcgacagagggaaggtatggtggaacatccggaaaacctgcttccgc
atcgtggagcacgactggtttgagaccttcatcgtcttcatgatcctcctcagcagtggg
gcactggcttttgaggacatctacattgaacaaagaaaggtgatacgtaccatcctggag
tacgccgacaaggtcttctcctatgtcttcgtcattgagatgttgctcaagtgggtggcc
tatggcttcaaggtgtacttcaccaacgcgtggtgctggctggatttcctcattgttgat
gtgtccattatcagcctgacagcgaactggctgggatattctgagctgggagccatcaag
tccctgcggacgctgagggctctgagaccactgcgtgccctgtccagatttgaaggcatg
agggtggtggtgaacgccttgctgggcgccatcccctccatcatgaatgtcctgctggtc
tgcctcatcttctggctgatattcagcattatgggggtgaacctctttgcaggaaagtac
taccgatgcatcaacaccacctcaggggagctctttgacatcagcgtggtgaacaacaag
agcgactgcatggccctcctctacaccaacgaggtcagatgggtcaacgtcaaggtcaac
ttcgacaacgtgggcttgggatacctctccttgctgcaggtggcgaccttcaaaggctgg
atggacatcatgtacgccgccgtggactcacgcgagattgaagagcagccagtgtacgag
atcaacctctacatgtacatctacttcgtcatcttcatcatcttcggcgccttcttcacc
ctgaacctgttcattggcgtcatcatcgacaacttcaatcagcagaagaaaaagtttgga
ggcaaagacatcttcatgacggaagagcagaagaaatactataatgccatgaagaagctc
ggctccaagaaaccccagaagcccatccccaggccatcgaacaagtttcaagggatggtg
tttgacttggttaccaagcaagtgtttgatataatcatcatgatcctgatttgtcttaac
atggtgactatgatggtcgaaacagatgatcaaagcgaactcaaaacatctgtcctctat
aagatcaacctagtcttcattgttatcttcaccggagagtgtgtgctcaaaatgtttgcc
ttgcgctactactacttcactattggctggaacatctttgactttgtggtggtcatcctc
tccatcttaggtatcgtcctctcggacatcatagagaagtacttcgtatcacccacactc
ttcagggtcatcaggctggcaaggattggccgtgtcctccggctgatccgaggggcgaaa
ggcatccggactctcctgtttgctctgatgatgtccctgcctgccctgttcaacatcggc
ctcctgcttttcctcgtcatgttcatctactccatctttgggatgtccaacttcgcctat
gtaaagaaggaggcagggatcgatgacatcttcaactttgaaacttttgggaacagcatg
atctgcctcttccagatcaccacgtcggctggatgggatggcctcctcagcccaatcctg
aacagtggccccccagactgcgaccccaacctggaaaaccctggcagttcggtaaaaggg
aactgtggcaatccatccatcggcatcttcttcttctgcagctacatcatcatttccttt
ctcatcgtggtgaacatgtacattgccatcatcctggagaacttcaacgtagccacggag
gagagcagcgaacctctctgtgaagacgattttgaaatgttttatgaaacttgggagaag
tttgacccagacgccacccagttcattgcatacagcaccttgtctgactttgtagacacc
ttacaggagccactcaaaattcccaagccaaacaagatcaagctaatcaccatggatcta
ccaatggttgctggggataaaatccactgtctggatatcctctttgccctgactaaggaa
gtgctgggagactcgggagagatggatgccttgaaggccaccatggaggagaagttcatg
gccgcaaacccctcaaaggtttcctatgaacccatcaccaccactctgaaaaggaaacat
gaggaagtctgtgctacaaaaatccagagggctttccggaggtacctcctgaggcgctcg
gtgaagcaggcatcttacatgtacaggcacagtaaggacgaggattccctgagagaggac
gcacctgagaaggaaggtctgattgccaccaaaatgcacgagatgtttgggaacagtggg
acagatgtggagacagcccctgcctttggtcttgcacctgttcccagctcagagactcaa
gatgctcctggcaaagcaaaagcatgggacaaggaacgcgttgtgaaagagtcgctggta
taa
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